| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0030 |
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| Symbol | |
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| ID | 4017896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 35954 |
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| End bp | 36871 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954000 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_561050 |
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| Protein GI | 91791399 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000103554 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGCC CCGATACCCA TGCGGTCAAA CAGTTTTTGT TGGCACTGCA AACGAATATT
TGCGCTGAAT TAGAACAACT CGATGGTGAA GCGAGCTTTA AGGCTGAATC ATGGCAGCGC
GCCGAAGGTG GCGGTGGTAC CAGCCGAGTG TTAACTCAGG GTAAGTTGTT TGAGCAAGCT
GGGGTAAATT TCTCCCATGT GAAAGGGGCG GCTATGCCAG CTTCTGCCAC GGCCCACAGA
CCTGAACTGG CTGGACGCAG CTTTGAAGCC ATGGGAGTGT CGTTAGTTAT TCACCCTAAT
AACCCATACA TACCAACGAC TCATGCCAAT GTGCGCTTCT TTATTGCCAG TAAAGAAGGT
GCCGATCCTG TGTGGTGGTT TGGCGGTGGT TTCGATTTAA CGCCTTATTA TCCCTTCAAA
GAGGATGTAC TCAGTTGGCA TCAGACGGCG GCAGACTTGT GTGCGCCTTT TGGTGAAGAG
GTGTATCCCA AGTATAAGAA GTGGTGTGAT GACTATTTCT TCTTGCCCCA TAGAAACGAA
ACGCGTGGAG TGGGTGGATT ATTTTTCGAT GATCTCAATC AGGCGGGTTT TGAGCAGAGT
TTTGCCTTTA TGCGCGCCGT GGGTGAAGGC TTTATTCAAG CTTATGCGCC CATCGTTGAA
CGTCGTAAGG CGCTTAGCTT TGGTGAGCAT GAGCGCCAGT TCCAATTATA CCGCCGTGGC
CGCTATGTGG AGTTCAATCT TGTCTATGAC AGAGGTACAC TGTTTGGTTT GCAAACCGGC
GGTCGAACCG AGTCAATCTT GATGTCCATG CCGCCATTAG TGCGTTGGGA GTATGGTTTT
ACTCCGGCAG CCGGTTCAGT GGAAGCTGAA TTGTATGAGG TATATTTAAA ACCTCAAGAT
TGGTTGCAGC AGGCTTAA
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| Protein sequence | MTGPDTHAVK QFLLALQTNI CAELEQLDGE ASFKAESWQR AEGGGGTSRV LTQGKLFEQA
GVNFSHVKGA AMPASATAHR PELAGRSFEA MGVSLVIHPN NPYIPTTHAN VRFFIASKEG
ADPVWWFGGG FDLTPYYPFK EDVLSWHQTA ADLCAPFGEE VYPKYKKWCD DYFFLPHRNE
TRGVGGLFFD DLNQAGFEQS FAFMRAVGEG FIQAYAPIVE RRKALSFGEH ERQFQLYRRG
RYVEFNLVYD RGTLFGLQTG GRTESILMSM PPLVRWEYGF TPAAGSVEAE LYEVYLKPQD
WLQQA
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