Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0027 |
Symbol | |
ID | 4017893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 34149 |
End bp | 34622 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637953997 |
Product | hypothetical protein |
Protein accession | YP_561047 |
Protein GI | 91791396 |
COG category | [S] Function unknown |
COG ID | [COG2922] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.29568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA TCCTCATGTA TCTATTTGAA AACTATGTTC ATAGTGAAAT TGAGTTGTTA GTTGATGAAG ATGAACTAAC CAAAGAACTC ACTCGGGCTG GTTTTCACCA AGCCGATATT TTAAAAGCGC TTTCTTGGCT TGAGCGTTTG GCTGATCTGC AAGAAAGTGA CAAGCCATAC CTTTGCAATC ATGCTCAGCA GTCATTTCGT ATCTATACCA AAGATGAAAT GGCTAAATTA GATGTTGAGA GTCGTGGTTT TTTATTATTC CTTGAGCAAA TCCAAGTGCT CAGCGTCGAG ACCCGTGAAA TGGTGATCGA CAGAGTCATG GAATTAGATG AGGCTAGCCT TATCTTAGAT GATCTTAAGT GGGTAATACT TATGGTACTA TTTAACGTAC CGGGTAATGA GTCTGCCTAT GAACAGATGG AAGACTTAAT CTTCGAGCAA CCGGAAGGAC GCTTACACTC TTAA
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Protein sequence | MFDILMYLFE NYVHSEIELL VDEDELTKEL TRAGFHQADI LKALSWLERL ADLQESDKPY LCNHAQQSFR IYTKDEMAKL DVESRGFLLF LEQIQVLSVE TREMVIDRVM ELDEASLILD DLKWVILMVL FNVPGNESAY EQMEDLIFEQ PEGRLHS
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