Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0023 |
Symbol | |
ID | 4017889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 30333 |
End bp | 31292 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637953993 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_561043 |
Protein GI | 91791392 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACCAT TAAATATTAT CTTTGCCGGT ACACCGGATT TTGCCGCTAG ACATTTACAA GCCTTACTCG ACTCTGAGCA CAATGTCATT GCCGTTTACT CGCAGCCAGA CAGACCGGCT GGGCGCGGTA AAAAACTCAG TGCCAGCCCA GTAAAAGAGC TAGCCTTGAG CCATGATATC CCGGTGTTTC AACCCGCCTC CTTAAGGGCT GTTGAAGCCC AAGCTGAGCT CGCCACACTG AATGCCGACA TCATGGTGGT GGTGGCTTAT GGCTTAATCT TACCTCAGAT AGTATTAGAC ACCCCACGCT TAGGTTGTAT TAACGTTCAT GGCTCTATCT TGCCTCGTTG GCGTGGCGCG GCGCCTATCC AAAGAGCACT TTGGGCCGGT GATACAGAAA CTGGCGTTAC CATAATGCAA ATGGATCTCG GCCTCGATAC CGGCGATATG TTACTTAAAA CCTCCTTGCC TATCGAAGAC GCTGATACCT CAGCGAGCCT CTATGAAAAG TTAGCCGTCC AAGGGCCCCA GGCCTTGCTC GAAGCACTCG ATGGCTTAAA TGCAGGCAAG CTTAAAGGTG AGCCACAAGA CCCAGCATTA GCCAACTACG CAGAAAAACT TTCCAAAGAA GAAGCAAGAC TCGACTGGAA CAAGAGCGCC AAACAGTTAT GGCAAGAAAT CCGAGCCTTT AATCCCTGGC CTGTGAGTTA CTTTGAATAC CAAGACAGCA CCATTAAAGT CTGGCAGGCA AGCTATAATC CACAGCCTAA TAGCGCACTT GCAGGTAGCA TTATCAAAGC AGATAAACAC AGCATAGAAG TCGCAACCGC CGAAGGCAGT TTGCAGCTAG AAATTATACA GCTGCCGAAC AAAAAACCAC TCGCGGTTGC CGACATTTTA AATTCTCGCG CCGATTGGTT TGCTCAAGGC CTTAGCTTGC TGCCAGAGGC GAGTTCATGA
|
Protein sequence | MKPLNIIFAG TPDFAARHLQ ALLDSEHNVI AVYSQPDRPA GRGKKLSASP VKELALSHDI PVFQPASLRA VEAQAELATL NADIMVVVAY GLILPQIVLD TPRLGCINVH GSILPRWRGA APIQRALWAG DTETGVTIMQ MDLGLDTGDM LLKTSLPIED ADTSASLYEK LAVQGPQALL EALDGLNAGK LKGEPQDPAL ANYAEKLSKE EARLDWNKSA KQLWQEIRAF NPWPVSYFEY QDSTIKVWQA SYNPQPNSAL AGSIIKADKH SIEVATAEGS LQLEIIQLPN KKPLAVADIL NSRADWFAQG LSLLPEASS
|
| |