| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0021 |
|---|
| Symbol | trkA |
|---|
| ID | 4017887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 27622 |
|---|
| End bp | 29031 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637953991 |
|---|
| Product | potassium transporter peripheral membrane component |
|---|
| Protein accession | YP_561041 |
|---|
| Protein GI | 91791390 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA TCATTTTAGG TGCAGGGCAA GTTGGCGGAA CCTTAGCGGA AAACTTAGTC
GGTGAGAATA ATGACATCAC CTTAGTGGAC AGCGACAGAG ACCGTCTGCG GATCTTGCAA
GACAAGTTTG ATTTGCGTGT AGTCGTGGGA CATGGCGCCC ACCCTAGTGT ATTAAGAGAT
GCCGGCGCCG AAGATGCCGA CATGTTGATT GCGGTTACCA ACAGCGATGA GTGTAATATG
GCGGCCTGCC AAATTGCCTA CACCTTGTTT GGCACCCCAA CCAAAATTGC CCGGATCCGC
TCGGAAGCCT ATCTAGATAT TCAAGATAAA TTATTCATCA ATAGCGAGAT AAAAAATAGC
GATGCCAAAC CTCGAGGGGG CTTTGTTATT GATGAGTTAA TTGCTCCCGA GCAACTGGTG
ACTAATTATA TCCAGCGCTT AGTAGAGTAC CCCGGTGCGC TGCAGGTGCT GCAATTTGCC
GAAGGCAAGT TAAGTTTAGT TGCGGTAAAA GCCTATTATG GTGGTCCACT CGTGGGTAAC
GCCTTGGCGA CCCTGCGTGA GCACATGCCC AATATTGATA CCCGAGTCGC GGCTATTTTC
CGTCAAGGCC GGCCCATTAT GCCTAGGGGC ACCACGGTAA TTGAAGCCGA TGATGAAGTC
TTCTTCCTTG CTGACACCCG TCATATCCGT GCAGTAATGA GCGAAATGCA AAAGCTCGAT
GGTACCTATC GCAATATTAT GATCGCCGGC GGTGGTAATA TCGGCTTTGG CCTAGCTAAA
AAACTGCAAC GCAATCATTC GGTGAAGTTA ATCGAGCACA GACAAGAGCG CGCCGAAGCA
CTGTCTGAGA AGCTAGAGAA AACCACAGTA TTTTGCGGTG ACGCCTCAGA TCAAGAGCTG
TTAATGGAAG AGCATATCGA CCAAATCGAT GTGTTTATTG CTGTCACCAA CGACGATGAA
GCCAACATAA TGTCAGCGCT ACTCGCTAAG CGGATGGGTG CCAAGAAAGT CATGGTACTT
ATTCAACGCG AAGCCTATGT GGACATAGTA CAAGAAGCCA ATATCGACAT CGCCATTTCA
CCTCAGCAAG CCACTATTTC TGCGCTACTG ACTCATATCC GCCAAGGTGA TATCTGTAAC
GTCTATTCAC TGCGCCGCGG GGCTGCTGAA GCGATTGAAG CCATCGCCCA CGGTGATTCC
AGCACCTCTA AGGTGATAGG CAAACAAATT GGTGAAATTA AGCTGCCGCC AGGCACCACT
ATAGGCGCGG TAGTACGTAA TGATGAAGTC TTGATGGGCC ATGATAGAAC TGTGATTGAA
CAGGGTGACC ACGTCATTTT ATTCTTAGTC AATAAGAAGT TTATCAGTGA TGTAGAAAAG
CTTTTCCAGC CGAGTGCGTT TTTCTTTTAA
|
|---|
| Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITLVD SDRDRLRILQ DKFDLRVVVG HGAHPSVLRD
AGAEDADMLI AVTNSDECNM AACQIAYTLF GTPTKIARIR SEAYLDIQDK LFINSEIKNS
DAKPRGGFVI DELIAPEQLV TNYIQRLVEY PGALQVLQFA EGKLSLVAVK AYYGGPLVGN
ALATLREHMP NIDTRVAAIF RQGRPIMPRG TTVIEADDEV FFLADTRHIR AVMSEMQKLD
GTYRNIMIAG GGNIGFGLAK KLQRNHSVKL IEHRQERAEA LSEKLEKTTV FCGDASDQEL
LMEEHIDQID VFIAVTNDDE ANIMSALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS
PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDS STSKVIGKQI GEIKLPPGTT
IGAVVRNDEV LMGHDRTVIE QGDHVILFLV NKKFISDVEK LFQPSAFFF
|
|---|
| |