| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0009 |
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| Symbol | glyQ |
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| ID | 4017801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 13357 |
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| End bp | 14262 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637953979 |
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| Product | glycyl-tRNA synthetase subunit alpha |
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| Protein accession | YP_561029 |
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| Protein GI | 91791378 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0111842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGATGA AACACGACGT AAAGACATTT CAGGGATTCA TACTGACCCT GCAAGAATAT
TGGGCGCAGC AAGGTTGCGC AATCGTTCAA CCCTTGGACA TGGAAGTAGG TGCTGGAACA
TTCCACCCGC AGACCTTCTT ACGTTCATTA GGCCCAGAGC CAATGAGCAG CGCCTATGTT
CAGCCTTCAC GCCGCCCAAC TGATGGCCGT TATGGTGAAA ACCCTAATCG TCTACAGCAC
TATTATCAGT TCCAAGTGGT CCTTAAGCCA TCACCGGATA ATATCCAAGA ACTCTATTTA
GGTTCTTTAC AAGCCTTAGG CATAGACACT CAAGTCCATG ATATTCGTTT CGTTGAAGAT
AACTGGGAAT CGCCAACATT GGGCGCCTGG GGCCTTGGCT GGGAAGTCTG GTTAAACGGC
ATGGAAGTGA CACAGTTCAC TTATTTCCAG CAAGTGGGTG GCATCGAATG CAGCCCTGTT
ACCGGTGAAA TCACCTACGG TCTCGAGCGT CTGGCTATGT ACATTCAAGA AGTCGACAGC
GTCTATGACT TAGTCTGGAC AGATGGTCCT ATGGGCCGTG TTACCTATGG TGACATTTTC
CATCAGAATG AAGTTGAGCA GTCGACCTAT AACTTCGAGC ACGCCGATGT AGACTTTATG
TTTACCCTGT TCGATCAGTG CGAAAAAATG TGTCAGCACC TATTGAGCTT AGACAAACCA
CTGCCGCTGC CCGCCTACGA GCAAGTCATG AAAGCCTCAC ACGCATTCAA CTTACTCGAT
GCGCGCCATG CCATTTCAGT TACCGAACGT CAGCGTTATA TCCTTCGCGT TCGAGCCATG
TCTAAAGGTG TTGCTGAATC ATATTATCAA GCACGTGAAG CGCTTGGCTT CCCTTTGTGT
AAGTAG
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| Protein sequence | MTMKHDVKTF QGFILTLQEY WAQQGCAIVQ PLDMEVGAGT FHPQTFLRSL GPEPMSSAYV
QPSRRPTDGR YGENPNRLQH YYQFQVVLKP SPDNIQELYL GSLQALGIDT QVHDIRFVED
NWESPTLGAW GLGWEVWLNG MEVTQFTYFQ QVGGIECSPV TGEITYGLER LAMYIQEVDS
VYDLVWTDGP MGRVTYGDIF HQNEVEQSTY NFEHADVDFM FTLFDQCEKM CQHLLSLDKP
LPLPAYEQVM KASHAFNLLD ARHAISVTER QRYILRVRAM SKGVAESYYQ AREALGFPLC
K
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