| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0001 |
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| Symbol | dnaA |
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| ID | 4017793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 10 |
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| End bp | 1398 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637953971 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_561021 |
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| Protein GI | 91791370 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000211976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGTTT CACTTTGGCA ACAATGTATC GGAAGACTAC AAGATGAGTT ATCGGCTCAG
CAGTTCAGTA TGTGGATCCG TCCGTTACAA GCTGAAATGG ATGGCGATAC TCTAGTGCTA
TATGCACCTA ATCGTTTTGT ACTCGATTGG GTTAGGGATA AGTACATCAA TATTATCAAT
CAGTTTTTTA CTGAGCAGAT GGGTAGTAAT GCCCCTAAAC TGCGTTTCGA TATTGGTAGT
CGTCCTTCTG CTCGCACTGT CCAGCCAGCC CCAGCCGCTC CTAGACCTAC AACAGGCCAC
ACCCAGACTA AAGCCCGCGT TGGCACGGCA TTTAATATCC AAGCCGAGCC TATGGCCAAT
GCTAATCATC GTAGTAACAT CAACCCCACT TACCAGTTTG ATAACTTCGT TGAAGGTAAA
TCAAACCAAT TAGGTAAAGC TGCAGCGATG CAAGTGGCTG AGAATCCAGG CGGCGCTTAC
AACCCATTAT TTTTGTATGG TGGTACTGGT TTAGGTAAAA CCCACTTATT ACATGCTGTG
GGTAATGGCA TTATTAAGAA TAATCCTAAT GCCAAAGTGG TGTACATGCA CTCAGAAAGA
TTTGTGCAGG ACATGGTTAA AGCCCTACAA AATAACGCCA TCGAAGAATT TAAGCGTTAT
TATCGCAGTG TTGATGCCTT GTTTATCGAT GACATTCAAT TCTTTGCCAA CAAAGACAGA
TCCCAAGAAG AATTCTTCCA TACCTTTAAT GCGTTATTAG AAGGTAATCA TCAGATCATC
TTAACCTCTG ATAGATATCC AAAAGAGATC GACGGCGTTG AAGATAGATT AAAGTCTCGC
TTTGGTTGGG GACTGACAGT GGCTATCGAG CCACCAGAAT TAGAAACCCG TGTGGCGATC
TTGATGCGTA AAGCCCAAGA GAGCGGCATT AATTTACCCG ATGAAGTGGC CTTTTTCGTC
GCTAAGCGTT TGCGCTCTAA TGTGCGCGAA TTAGAAGGGG CATTAAATAG GGTTATCGCT
AACGCAAACT TTACTGGCAG ACCTATTACC ATAGATTTTG TCCGTGAAGC CTTAAGAGAT
TTGTTAGCGC TACAAGAAAA ATTAGTAACA ATAGACAATA TACAAAAGAC TGTCGCCGAG
TATTATAAGA TCAAGATGGC TGATATGTTG TCTAAGCGAC GTTCACGTAG TGTGGCAAGA
CCAAGACAGG TTGCCATGGC GCTTTCAAAG GAACTCACCA ATCAAAGTTT ACCGGAAATT
GGTGATGCAT TTGGTGGTCG CGACCATACG ACTGTATTGC ATGCATGCCG CAAAATTGCA
CAATTACGTG AAGAAAGTCA TGACATTAAA GAAGATTATG CTAATTTGAT TAGAACTTTA
TCTTCTTAA
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| Protein sequence | MAVSLWQQCI GRLQDELSAQ QFSMWIRPLQ AEMDGDTLVL YAPNRFVLDW VRDKYINIIN
QFFTEQMGSN APKLRFDIGS RPSARTVQPA PAAPRPTTGH TQTKARVGTA FNIQAEPMAN
ANHRSNINPT YQFDNFVEGK SNQLGKAAAM QVAENPGGAY NPLFLYGGTG LGKTHLLHAV
GNGIIKNNPN AKVVYMHSER FVQDMVKALQ NNAIEEFKRY YRSVDALFID DIQFFANKDR
SQEEFFHTFN ALLEGNHQII LTSDRYPKEI DGVEDRLKSR FGWGLTVAIE PPELETRVAI
LMRKAQESGI NLPDEVAFFV AKRLRSNVRE LEGALNRVIA NANFTGRPIT IDFVREALRD
LLALQEKLVT IDNIQKTVAE YYKIKMADML SKRRSRSVAR PRQVAMALSK ELTNQSLPEI
GDAFGGRDHT TVLHACRKIA QLREESHDIK EDYANLIRTL SS
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