| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_0898 |
|---|
| Symbol | |
|---|
| ID | 8592432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | + |
|---|
| Start bp | 892961 |
|---|
| End bp | 894664 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003303964 |
|---|
| Protein GI | 268679533 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0001044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAC AAAATTTATT TAGTTCTAAC AATACAGGAA TTATAAAAAT CTTTACATAT
AAGGATTTTT TCTACAATAA CGGGATCGTG AATCTGTACC AGTTTCTCCA AAACAAAGAT
TTTGATATAA CTTTTTCATT ACATCAAAAT GAATTAACCT TAGAATTTGA TGCGCAAAAA
GAAGATCAAG TTTATACTCA AATCCTTAAT TCGTTTTTAA AAGACAATAA AATAGTTTAT
CAAACAGATA ATGATCGGTG GTATTTTGAT GAAACTAAAA TGGATTTTAT TGTAGATAAA
AAGTTTGACA CCAAAGGTGG TCAGAAAAAT GATTTACGAA ATGGTGTTTA TTTGTACAAA
AAAATATCAG AGTTAGGATT AAGTCGAGAA GAGGTTGAAA AACTTTATCT TGATTTCTGC
GAAAGAACGA AGTTAAAGCC AGAAACAGAG TCAAATGGTA CTTTAAAAGT TCCCAATAAA
AACAATGAAG TGATTGTTGC TATCGCATTA GATACGGCGA TTGAGCGATT TAGCCAGTAC
TTTGCCAGTA CTGATATTTT ATCGATTGAT TCAAAAATTC ACTCTTTTGA AGATGGACAA
GACTATTTTC ACGACATGCT TAAACAGCCA CAAACGTACA AAATAGACAA ATGGAATGCT
TTAATGTATT GGTTTGGTGG ACGAGTACAA AGATTTTATA ATTATTCGTA TTTTATTTAT
CCTAATTCAT CTAACTTGGA AGCACTCAAT ACCTTTAAAA AGTTTTTACA AATCAATGAC
AATAGACAAG AGTATAGAAA TGATGATGGC AAAGTTGTGA CTACGTCTTC AAATATAGAT
TTCTTTAACA TTCTAAGAAA AGATGAAATT GTCAATAAAT ACTTTTATAT TTCCAAAAGT
GCCGAAGAGT TTGAAGTGAA GTTTTTTATG TATCTTTTTT CGGTAATTTA TCATATTGAA
AGTGAATATG AGAGTTTACA AGATGAAGAT TTGGCAGTGT TGTTTGACGA CGATACCCTT
GAGAATTCAA AAATATTGTT TGAGCTTTTA CAATACATGA GTTTTGTTAT TTATACCGAT
GATGGAACCT TTAAAACTTC GTTGAGTGAA TATACTAAAG CGTATCGACT TATTCAGTTC
TTTATGAAAT TAAAAGAAGA ATCGCTTTTT AAATATTTAG GGCATGTGTT TCAGGTTTTT
TCTTTATCGC AAAGCAAAGA TGAAGTTAAT TTAAATTTAC AACATTGGTG TCAAAAAATA
CTTTCATTTA ACAATGTGCG AAAAGAGTAT TTTGCGGCGA GTTTTTCTAT TTTAAAAAAT
AATTCACAAG GTTTTGGAAA AGAGTTATAT GCGTTTGAAC AGAGTTATTT AAAAAATATT
TTAGGAGGAA GTGAAATGGG TATTCATGAA AATGCTAAGA AAATTGGCGA TGGTGTTGGC
TTCTTTTGTG CGGAGCTTGG TGATAAAGAC TTATTATTTA AGCTAAGAAG CGTTAAAAAC
TATAAACAGT TGGTGTCATA TTTTAAAGAT TTGAAATTTT CAAGTCTTAA AAATGCAGAC
AAAGCACGAT TTTCTAATGA GTTTAATGAA TCACTGGAAA ATCTTTTAGT CAATGTTGAA
CAAAATTGGG AAATTGCAAG AGATTATATA GCAATCTATG CAATCGATAA ATTTAAAACA
GTTAGTTTTG CAAAAACAAA ATAA
|
|---|
| Protein sequence | MKEQNLFSSN NTGIIKIFTY KDFFYNNGIV NLYQFLQNKD FDITFSLHQN ELTLEFDAQK
EDQVYTQILN SFLKDNKIVY QTDNDRWYFD ETKMDFIVDK KFDTKGGQKN DLRNGVYLYK
KISELGLSRE EVEKLYLDFC ERTKLKPETE SNGTLKVPNK NNEVIVAIAL DTAIERFSQY
FASTDILSID SKIHSFEDGQ DYFHDMLKQP QTYKIDKWNA LMYWFGGRVQ RFYNYSYFIY
PNSSNLEALN TFKKFLQIND NRQEYRNDDG KVVTTSSNID FFNILRKDEI VNKYFYISKS
AEEFEVKFFM YLFSVIYHIE SEYESLQDED LAVLFDDDTL ENSKILFELL QYMSFVIYTD
DGTFKTSLSE YTKAYRLIQF FMKLKEESLF KYLGHVFQVF SLSQSKDEVN LNLQHWCQKI
LSFNNVRKEY FAASFSILKN NSQGFGKELY AFEQSYLKNI LGGSEMGIHE NAKKIGDGVG
FFCAELGDKD LLFKLRSVKN YKQLVSYFKD LKFSSLKNAD KARFSNEFNE SLENLLVNVE
QNWEIARDYI AIYAIDKFKT VSFAKTK
|
|---|
| |