Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0897 |
Symbol | |
ID | 8592431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 891917 |
End bp | 892639 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | CRISPR-associated protein Cas6 |
Protein accession | YP_003303963 |
Protein GI | 268679532 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000104953 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATATT TTGAACTGAG ATGCGTAGCA TATTTGAAAA AAGAGATGGC TTTTGAGCGT AGTTTTGAGG CGCTTTCCAA ATACATCAGC TTTAGCATGT ACCAAGAAGG AGAAGGCGAA GTCCACCAAA AAGAGGGCTT CAAATATTAC GTTTTTAGCG GCTTTAAGCC CAAAGACGAG GACATTCAAA AGAAAGCTTA CCGAGGCGGT GAAACGTACC CCTTTACCAT TCGCTCCCTC GATGAAACGC TCATCGACAC ACTTTCAACT TCGCTGCGCC AAAACATCAA CAATGAAAAT CTCCTTGTCG TCGAAGCTCA TAAAAAAACC ATTTCCCAGT TTTTCATCAC CGAACTCTAC AGCGCCACCC CCGTCATCGT CTCGGTAAGC AACGGCAAAT ACTGGACCAT GAACGAAAGC GGCGACATCG TCCAACTCCA ACGTCAACTC CACGAAAACG CCGAAAAAAA ATACCAAAGC TTCTTCGGGG AGTCTTTACA TGTAAACCAA AATTTCATCC AACTCATCGA AATCAAAAAC AAAGTCCCCC AAAATATCCT CATCACCAAA GAAGGCAAAT CCATCCGCTT TTTTGGCAAT AAATTTAGGA TTGTGCCTAA TGAAGATGAG GTGAGTCAGA AGTTGGCGTT TGTTGCGTTG GCTTGTGGGG TTGGGGAGAA GAATAGTTAT GGGGCCGGGT TCTGTGTGGG TGGTCGTGTA TGA
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Protein sequence | MRYFELRCVA YLKKEMAFER SFEALSKYIS FSMYQEGEGE VHQKEGFKYY VFSGFKPKDE DIQKKAYRGG ETYPFTIRSL DETLIDTLST SLRQNINNEN LLVVEAHKKT ISQFFITELY SATPVIVSVS NGKYWTMNES GDIVQLQRQL HENAEKKYQS FFGESLHVNQ NFIQLIEIKN KVPQNILITK EGKSIRFFGN KFRIVPNEDE VSQKLAFVAL ACGVGEKNSY GAGFCVGGRV
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