Gene Sdel_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_0254 
Symbol 
ID8591770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp236564 
End bp239074 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content38% 
IMG OID 
ProductPAS sensor protein 
Protein accessionYP_003303326 
Protein GI268678895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CAAAAACCTA CGCACTTTAC GGTGCTTTTA TTCTTATTTT TACAATTACC 
CTTTTGCTCA GCGTCTGGTT TGGTAAGAAA ATACAAGAAG AACACCACAT TCAGCAAGAG
CGTATCACCG TTTTTGAACG CTACAAAGCT GTTTTAGATT TAGAAAAGAC CTTAATTAGA
AAAACCGTTG CGGATTACTC TTTTTGGGAT GAAATGGTTG ATTTTGCCAA AGAACCCAAT
CACGCATGGA GCAAAGACAA CCTTGAAGAA CCTATGGTCA AAACATTTGG TGTCTCTTAT
ATTTATGTTT ATAATGAACA TAAAAAACTT GTTTATAGCT ATGACGCACT CAAAAAAAAC
ACCCCAGCGC CCATACTTGA ACCTCTCTCA GACGAAAAAC CTGAATTTAA AGAGTTTTAC
GCTTTTTCTG AGGGCAAATG TATCCAATAC TTTTTAGCAC CCATTCATCC TTTTTCAGAT
GTGGAGCGTA AAGGGAAACC TTTGGGTTAT TTTATTTTGG GACGCGTTTT GGATGATGTG
TTTTTTGAAA AGATGGAAGA GATTACCCTT GGTCGCTCCT CTTTAATTCA AAAAAAACCT
TTGGAAAATC AATCAAGCTC TTTTTATGTA GAACTTCCTT CTCTTCTCAA TGAAACAGTT
GGGTATATTC AGTTTGATTA TCATCCTTTG GTGATTGTAT TTATCTCAAA CTTACAAAAT
TCTCTACTGC TTGCGGGACT CATTCTTTTA GGTATCGCTT TAATGCTCTT TTATCTCTTA
ACTAAACTTA CATTTTTAAA ACCCATTCAT CTTATCTCTA TGACACTCCG CACACATCAT
CTCGGTTACA TCTTTGCCCT TTCAAAGCAG AAAAATGAGT TAGGTGAAAT CGCCCATCTT
ATTTACGAGC ATGAAAAGCA AAAAAAACTT CTCGAAGAGT ATAAAGAAGC CATTGATGAA
AATACGATTG TCTCACGCAC AAATGCCAAA GGGATTATCA CCTATGCCAA TGAGCAGTTT
CTTGCTATTT CAGGCTATTC TAAAGAAGAA CTGATAGGAA AACCGCACAA TATTGTTCGT
CATCCAGACA ATCCATCGCA CTTTTTTCAA GAGATGTGGG AGGTGCTCAA AGCGGGTAAG
ACATGGAAGG GGATTATTAA AAATAGGCGC AAAGATGGAA GCGTTTATTA TGTCAAATCG
GTCATTATGC CCCTGCTCTC CTTAGATGGT AAAATCGAAT CTTATATGGC AATTCGCCAC
GATGTCAGCG ATTTGTTTGA ACAACTCGAA GTATTACAGC AAACAAGCAC ACTCAATCTT
CCTAGCCGTA AACACCTTTT AGAGCAAATT GAAAAATCAA AATATCCACA CCTTGCCATT
TTGAATATTT GTGATTTTCG AGAAATTAAT GCCTTATATG GTCAGGCATT TGGGGATGCA
TATCTTTATG AATTTGCCCA AAACCTTCAA AAATACATTC GTAAAGGAAT GGTCGTTTTT
CACCTCCAAG GAGATGAATT TGCCCTCTAC TGCGATAAAG AAGTCAGCGA AGAAGCCTTC
AATACCTTTT GTGATACCTT ACTCACCCGC CTTCAGCAAG AAGGTCTTAC CATCAAAAAC
AAATCTTATA CTGTGGCCTG TCGTATTGGA ATTGCTAATG GGCTCTCTTA TCTCTATAAC
CGAGCGGAAA TCGCACTCAA AGAAGCACGC AATTCGCATA AATCATTGGT GATCTATGAT
GATAGAGACG GGTTTCAAGA GCGCCTCAAA GAGGATATTC AGTGGAATAA AACCCTACGT
GAAGCTCTGA TTAATAAACG CTTTACCCTC TTTTTACAAG AGATTGTTCC TTTACATGTA
AAACCCAATG CACGTAAAAA ATATGAAGTG CTCATTCGCC TTATTGATGA AAATAATCGT
GTCATATCGC CTTTTCATTT TATTGATTTA GCAAAACGCT TACACCTTTA CGCACAAATT
ACCCACTTTG TCCTTGAAGA GAGTGTGCAA GTCGCCTTGC ATCTAGGGTG CGATGTTTCT
ATTAACATTA CCAAAGAAGA TATTTTGCAT CATGAAACCA CGACGCTTTT ATTTGCTCTT
TTAAGCCAAT ATCCTGAACT TAAGGGGCAT ATCATTCTTG AACTTGTTGA ATCTGAGGGA
ATAGAAGATG TTTCAGAAGT GCGCTCTTTC CTTCAAAAAG CACACGAAAA AGGTTGTTTA
TTAGCCATTG ATGACTTTGG TTCTGGCTAT TCAAACTTCG AATATCTTTT ACGATTAAGT
GTTGATTTTA TAAAAATTGA TGGCTCCCTT ATTAAAAATA TTGACAAAGA TGCCACCGCC
TACGCTACGG TTAAGACTAT CAGTACCTTT GCTAAAAATC TAGGTATCGA AGTGGTCGCA
GAATTTGTCC ATAGTGCTGA CGTACTGGAG AAAATCAAAG AACTTCCTAT AGACTATGCA
CAAGGATTTT ACCTGCATGA ACCAGCGCCC AAAGAGTCTA TACAACTATG A
 
Protein sequence
MKIAKTYALY GAFILIFTIT LLLSVWFGKK IQEEHHIQQE RITVFERYKA VLDLEKTLIR 
KTVADYSFWD EMVDFAKEPN HAWSKDNLEE PMVKTFGVSY IYVYNEHKKL VYSYDALKKN
TPAPILEPLS DEKPEFKEFY AFSEGKCIQY FLAPIHPFSD VERKGKPLGY FILGRVLDDV
FFEKMEEITL GRSSLIQKKP LENQSSSFYV ELPSLLNETV GYIQFDYHPL VIVFISNLQN
SLLLAGLILL GIALMLFYLL TKLTFLKPIH LISMTLRTHH LGYIFALSKQ KNELGEIAHL
IYEHEKQKKL LEEYKEAIDE NTIVSRTNAK GIITYANEQF LAISGYSKEE LIGKPHNIVR
HPDNPSHFFQ EMWEVLKAGK TWKGIIKNRR KDGSVYYVKS VIMPLLSLDG KIESYMAIRH
DVSDLFEQLE VLQQTSTLNL PSRKHLLEQI EKSKYPHLAI LNICDFREIN ALYGQAFGDA
YLYEFAQNLQ KYIRKGMVVF HLQGDEFALY CDKEVSEEAF NTFCDTLLTR LQQEGLTIKN
KSYTVACRIG IANGLSYLYN RAEIALKEAR NSHKSLVIYD DRDGFQERLK EDIQWNKTLR
EALINKRFTL FLQEIVPLHV KPNARKKYEV LIRLIDENNR VISPFHFIDL AKRLHLYAQI
THFVLEESVQ VALHLGCDVS INITKEDILH HETTTLLFAL LSQYPELKGH IILELVESEG
IEDVSEVRSF LQKAHEKGCL LAIDDFGSGY SNFEYLLRLS VDFIKIDGSL IKNIDKDATA
YATVKTISTF AKNLGIEVVA EFVHSADVLE KIKELPIDYA QGFYLHEPAP KESIQL