| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_0020 |
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| Symbol | |
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| ID | 8591531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurospirillum deleyianum DSM 6946 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013512 |
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| Strand | + |
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| Start bp | 19797 |
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| End bp | 21416 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | |
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| Product | nickel ABC transporter, periplasmic nickel- binding protein |
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| Protein accession | YP_003303093 |
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| Protein GI | 268678662 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00232018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCGGTTTAGC GATTTTAGCG TTAGTGGTCA TTGGTGTGGG CTTTTACTTC
TCTTCACCCA AAGAAGAGCC AAAAGCAGAA GCGCCAAAAA AGAGTGAGCA GGTAGTTACA
TTTGCCAATT TTAGAGATAT TAGGGATTTA AATCCGCATT TGTACAGTGG TGAGTTGTAC
GCTCAAAATA TGTTGTTTGA ATCGTTGGTA CATATTGCTA GTGACGGTAA AATTGAGCCG
TGGTTAGCGA CTGAATGGAA GATTTCAGAT GAGGGAAAAA CCTATGTGTT TAAACTGCGT
GAAGATGTCT CATTTTCAGA TGGCGAAAAG TTTAACGCCA AAGCTGCCAA AGCCAATTTC
GATGCGATTT TAAGCAACAT TAAACGCCAC GGATGGTTAG AGTCTGTACG TTTGATGGAC
GCAATTAATC AAAAAGGTGG CGAAGCGGTA CAAGCCAGTG GTGAGTATGA GCTGACCCTT
AAACTCGATG CTCCTTATTA CCCACTTTTA GTAGAACTTG GCGTGATTCG CCCGTTTCGT
TTTATCTCTC CAAAGGCGTT TATTAATGGG ACAACCAAAG ATGGCGTGAG TGCTCTTAGT
GGAACGGGGC GTTACGTCTT AAAAGAGAAC CATAAAGATG AGTATGCGGT GTTTGAGCTC
AATCCTAATT ATTGGGGCAA AAAACCAGAG CTTCAAAAAG TCATTGTTAA AGTGATTCCT
GATAATCAAA CCCGTTTGAT GGCGCTTGAA AAAGGCGAGA TTGATCTTGT TTTTGGTGTC
AATATGGTCG ATTCAGCCGC CTACAACAAA TTTGCAAATC TTAAAGGCTT TAGTAGTGCT
ATCTCCGAGC CTCTCTCAAC CCGTATGATT TTGCTTAATA CCACCGATGC CATCACGGGT
GATGTGAATG TTCGTAAAGC GATTCAGCAC GCAACCGATA AAGAGACGAT TTCTAAAGCG
ATTTTTGCGG GCATTGAAAG TCCAGCTGAT TTGTTGCTCT CTAAAAATAC CCCTTATGCG
AACATTGGAT TAACTCCCTA TGCATTTGAT AAAGCCAAAG CGGAAGCGCT TTTAGAAGCT
TCTGGTTGGA TGAAAGTTGA AGGTAAAAAA TACCGCCAAA AAGAAGGACG TGAATTAGCT
ATTACTTTAA ATTACAACAG CAACAATGTC ACCGATAAAA CCATTGCCGA GTTTTTACAA
GGAGAATTTA CCAAAATTGG TATGAACCTC AACATCGTGG GTGAAGAAGA ACAAGCCAAT
CGTGACCGTA TGAAAGCAGG ATCGTTTCAG ATGGTGTTTA ACATCTCATG GGGGATGCCA
TACGATCCAC AATCTTTCTT AGCGGGTATG CGAAAAGTCG TTTACGGGGA TTATTTGGCG
CAACAAGGAC TTAAAGATAA AGCCTTAATT GATGAGACCA TTTTACATGC GCTTGAGAGT
ACGGATGAGA TTAAACGTCA AGAACACTAC CGTTTTGTCT TAACCAGACT TCACGATGAA
GCGGTCTATT TGCCATTAAC CTACGAGAGA AACCGTGCGA TTTTCAACCA AAAGCTTGAA
AATGTCGGCT TTGATGTCTC GAAGTATGAA GTTCCTTTTG AGCGAATGCG TGTTAAATAA
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| Protein sequence | MKKIGLAILA LVVIGVGFYF SSPKEEPKAE APKKSEQVVT FANFRDIRDL NPHLYSGELY
AQNMLFESLV HIASDGKIEP WLATEWKISD EGKTYVFKLR EDVSFSDGEK FNAKAAKANF
DAILSNIKRH GWLESVRLMD AINQKGGEAV QASGEYELTL KLDAPYYPLL VELGVIRPFR
FISPKAFING TTKDGVSALS GTGRYVLKEN HKDEYAVFEL NPNYWGKKPE LQKVIVKVIP
DNQTRLMALE KGEIDLVFGV NMVDSAAYNK FANLKGFSSA ISEPLSTRMI LLNTTDAITG
DVNVRKAIQH ATDKETISKA IFAGIESPAD LLLSKNTPYA NIGLTPYAFD KAKAEALLEA
SGWMKVEGKK YRQKEGRELA ITLNYNSNNV TDKTIAEFLQ GEFTKIGMNL NIVGEEEQAN
RDRMKAGSFQ MVFNISWGMP YDPQSFLAGM RKVVYGDYLA QQGLKDKALI DETILHALES
TDEIKRQEHY RFVLTRLHDE AVYLPLTYER NRAIFNQKLE NVGFDVSKYE VPFERMRVK
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