Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_4012 |
Symbol | gidA |
ID | 3967431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 5050606 |
End bp | 5052498 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637923109 |
Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
Protein accession | YP_529479 |
Protein GI | 90023652 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.775165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.335269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTACC CCACTCAGTA CGATGTGATC GTTATTGGCG GCGGCCACGC TGGCACCGAA GCCTGCCTAG CTGCAGCGCG TATGGGATGT AAAACCCTTC TGCTCACCCA CAACATAGAA ACTCTGGGGC AAATGAGCTG TAACCCCGCC ATAGGCGGCA TTGGCAAAAG CCATTTGGTA AAAGAAATTG ATGCCCTTGG CGGCGCCATG GCGCTGGCAA CCGACAAAGG CGGCATCCAA TTCCGCATTC TCAACAGCCG CAAAGGCCCT GCCGTGCGCG CAACCCGCGC TCAAGCAGAC CGCGCACTTT ACAAAGCGGC TGTACGCGAA ATATTAGAAA ACCAGCCCAA TCTCGATATA TTCCAACAGG CTGCCGACGA CTTAGTGGTT GAAGGCGAGC GCGTTACCGG CGTTACCACC CAAATGGGTG TCACCTTCAA AGCGCCCACC GTTGTGCTTA CAGCCGGTAC CTTTTTGGGC GGTAAAATTC ACATAGGTAT GGAGAACCAC TCAGGTGGCC GTGCAGGCGA CCCGCCCTCC ATCGCACTAG CAAGCCGTTT GCGCGAACTA CCGCTGCGCG TAGACAGGTT AAAAACCGGC ACCCCACCGC GTATTGACGC GCGCAGTGTG AATTTTGACG GGCTAGAAAA GCAGTGGGGC GAAGAAAAAA CCCCAGTGAT GAGCTATATG GGCTCGCTGG CAGATCACCC CGAGCAAACC TGTTGCTGGA TAACCCACAC CAACGCTCAA ACCCACGATT TTATTCGCAG CGGTTTCGAT CGCTCGCCCA TGTTTACCGG CGTTATTGAA GGGGTTGGCC CGCGTTACTG CCCCTCTATC GAAGACAAAG TGAACCGCTT TGCCGATAAA GACAGCCACC AAATATTTAT TGAGCCAGAA GGCCTTAAAA CCCACGAGCT CTACCCTAAC GGTATATCCA CCAGTTTGCC GTTTGATGTG CAAATGGCCT TTGTGCGCTC GATAAAGGGC TTTGAAAACG CCCATATCAC CCGTCCAGGC TATGCTATTG AGTACGATTT TTTCGACCCA CGCGATCTGA AGTACAGCTT TGAAACAAAG CACATCGAAG GTTTGTTCTT TGCTGGCCAA ATTAACGGCA CCACCGGCTA CGAAGAAGCT GGCGCCCAAG GTTTGTTGGC TGGCTTAAAT GCGGCGCTTA AAGCCCAGGG CAAAGAAGCC TGGTGCCCGC GTCGCGACGA AGCCTACATA GGTGTACTGG CAGACGATCT TATTTCTATG GGCACCCGCG AGCCCTACCG CATGTTTACC AGCCGCGCCG AATACCGCCT ATTGCTGCGC GAAGATAACG CCGATATGCG CTTAACCGAA AAAGGCCGCG AATTAGGCTT GGTAGATGAT GCCCGCTGGC AAGCGTTCTG CAAAAAACGC GAAGCCATCG AGTTGGAAAC CCAGCGTATG CGCACCACGT GGATTCAACC CAATAGCGCC GAGGCGAATG CCCTAGCCGC AAAAATGCCT GCCGAGCTAG CACGTGAGTA CTCACTTCTA GATTTGCTCA AGCGTCCAGA GCTTACCTAC GACGACCTAG GCAGCCTTAA AGGCGAAGCG GTAAGCGACC CGCAAGTGGC TGAGCAGGTA GAAATTAATA CCAAGTATGC CGGCTACATC AATCGCCAAA CCGACGATAT TGAGCGTATG CGTCAGCACG AAAACACCGT AATCCCGGTG GAATTCGACT ACATGAGCGT GGAAGGCCTC TCTAACGAGC TTAAGCAAAA ATTGTCCGAG GCGCGTCCAG AAACATTGTC GCGCGCATCG CGTATACCGG GTGTTACCCC TGCCGCTGTA TCACTAATTC TTATTTACCT TAAAAAACGC GGCTTGCTTA AAAACAAAGC TGCGCTGGCA TAA
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Protein sequence | MIYPTQYDVI VIGGGHAGTE ACLAAARMGC KTLLLTHNIE TLGQMSCNPA IGGIGKSHLV KEIDALGGAM ALATDKGGIQ FRILNSRKGP AVRATRAQAD RALYKAAVRE ILENQPNLDI FQQAADDLVV EGERVTGVTT QMGVTFKAPT VVLTAGTFLG GKIHIGMENH SGGRAGDPPS IALASRLREL PLRVDRLKTG TPPRIDARSV NFDGLEKQWG EEKTPVMSYM GSLADHPEQT CCWITHTNAQ THDFIRSGFD RSPMFTGVIE GVGPRYCPSI EDKVNRFADK DSHQIFIEPE GLKTHELYPN GISTSLPFDV QMAFVRSIKG FENAHITRPG YAIEYDFFDP RDLKYSFETK HIEGLFFAGQ INGTTGYEEA GAQGLLAGLN AALKAQGKEA WCPRRDEAYI GVLADDLISM GTREPYRMFT SRAEYRLLLR EDNADMRLTE KGRELGLVDD ARWQAFCKKR EAIELETQRM RTTWIQPNSA EANALAAKMP AELAREYSLL DLLKRPELTY DDLGSLKGEA VSDPQVAEQV EINTKYAGYI NRQTDDIERM RQHENTVIPV EFDYMSVEGL SNELKQKLSE ARPETLSRAS RIPGVTPAAV SLILIYLKKR GLLKNKAALA
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