Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3988 |
Symbol | |
ID | 3967311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 5021342 |
End bp | 5022499 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637923085 |
Product | DNA gyrase, B subunit |
Protein accession | YP_529455 |
Protein GI | 90023628 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.338289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA GAGTCATCGG ATATTTTGAG GCAGATGTTC TATCTCTATA TAGCTCGAAC CCTCATAAAT ACACCATAGA CACTGACTAC TTTGAAGGTG AGCTAAAAAC ATCCGCAGAA TATTTTGAAG AGCTTGATAC TTCTGGGAAG CTTGATGAGT ACATCCGTAT TAGATTCGGG TATCACGCAA AGTCTGATGG AGGACTGTGC TTGGCTGTTT TTATCCCAGA CTTGGCTAAC GCTGCGCCCT TAGAGCAAAA GAAATGGTCA CCATTTATTG TTAAAGATGA TGCTTTAGCA GATTCAGACG AGCGGTTTAC CATGTGGTTT GATAGAAATA TTCAGGGTAG CTGGGGAGTG AAAAATGGGG CTAGAAAGCG CCTTACAGCA GTAATCGAGA AAATCAATGC TTGCTGTAAA GCTCTCACTG GACATCCTTT ATATTCCAAA GTCCCAAATA GTTCTGTTAC ATACCCTAGT TCTCAGAATA CTCACTCTTA TGAGGATTCA CATAAGAATT TATACGGTTT TCTCGTTGAT GGTTTGTCTA AAAGATGTTT ACTCGCTCTG GCTGAAAAAC GTCAAAGAAA TATACTAGAA GCAGAAAATA TGAAACCACC GACTTTGTTG CGTCATGTAT TCACAGAGTT CGATAAAGAA TCTCAGTTGC ACAAACTTTT AAGTCTAATA AGCACTGAGC GTGGCAATAG TAGTCACGGT GTAAGAATTT CTGCAAAATC ATGTGATGCC TTCGGCCTCT TTAATCGTGA TTTAGAGCGG GCCGTCGAGT CATTTGAACT GTTGCTAAAT CTTATCGAGC AAGAATTCAA TGTTTCTGCA ACACATGAAC TAAGCAGGCA GGAAATGATG CAGTATTTAC CAAAGATTGT TGATGGCGGC ATAGAATCCG ATTACTCGAT CTGCCAAGCT ACCCAAATGG TTGGTAAAAC AGTTGAAAAA GTGTGGTTTG GCTTGCGAGA GGATCACGTA CAGATTCACC AAAGTGAAGC GTTATTCATT CAATTTACAA ACGGTGAACT ACTCGCAATT GATACAGGTT CCAATGTTTT GAATATAGCA GACCAAGCAA AAATAAGGCC CAACGAATTC CATGTTGATC TGAATTTAAC TTGGGTTCCA GCACCATCAA ATGGCTAA
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Protein sequence | MTQRVIGYFE ADVLSLYSSN PHKYTIDTDY FEGELKTSAE YFEELDTSGK LDEYIRIRFG YHAKSDGGLC LAVFIPDLAN AAPLEQKKWS PFIVKDDALA DSDERFTMWF DRNIQGSWGV KNGARKRLTA VIEKINACCK ALTGHPLYSK VPNSSVTYPS SQNTHSYEDS HKNLYGFLVD GLSKRCLLAL AEKRQRNILE AENMKPPTLL RHVFTEFDKE SQLHKLLSLI STERGNSSHG VRISAKSCDA FGLFNRDLER AVESFELLLN LIEQEFNVSA THELSRQEMM QYLPKIVDGG IESDYSICQA TQMVGKTVEK VWFGLREDHV QIHQSEALFI QFTNGELLAI DTGSNVLNIA DQAKIRPNEF HVDLNLTWVP APSNG
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