Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3987 |
Symbol | |
ID | 3967310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 5020003 |
End bp | 5021019 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637923084 |
Product | RecF protein |
Protein accession | YP_529454 |
Protein GI | 90023627 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.462952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCC GCAATCGCTT TTCTTTATTG TTTGTCAGTG CTTGCTTGGT GTTGAGCGCC TGTGCGGAGC AGGAGTCTTA CACCTCTTCC ACATCCGACA GAACACAGCA GGTGGCAGGT ACTGCGTATA GGGCCTGCGA CAATTGCCCG GAAATGATCG TGGTGCCGGC GGGCAGTTTT CTGATGGGCA GCCCAGCTTC CGAAGAGGGG CGCAGCGAAG CCGAGGGCCC GCAGCTTAAG GTGACCCTGG CCAAGGTCTT TGCCATGGGC AAACATGAAG TCACGCGTGG CCAATTCAGA GCATTTGTGG ATGCGACGGG TTACCTCACT CAAGCAGAGG TGGAGGCGGA CAGGGGCTGC CTTACTCTCG ATGTGCGTGA TGATGGCAAC GGTAATTGGG GCTGGTCGGC GAACCAGAAC TGGCGCAACG CGACACTTTA TGGGTTGGAG CAGGGCAGCG ACGCGCATCC GGTACTGTGT GTGAGCCAGC AGGATGCCTT GGCCTACATC ACTTGGTTCA ACGAAACCCA CTTGCCGCCC GATGAGCGGG CATATCGCCT GCCTACGGAA GCGGAATGGG AGTACGCCGC ACGGGCCGGA AGCAGCACCA CATACAGCCA TGGCACCGAT GTGACCGCCA TGTGCCGCTA TGGAAATATC GGCGACCAGA CTGCTCTGCC AAAGGGTCAC GCGTGGCCCG AATGGGTCAC CTGCGATGAT GGTTATGTGT TCACGGCCCC TGTCGGCAGC TTTCAAGCCA ATGCCTTTGG TTTACACGAT ATGCACGGCA ATGTCTGGGA GTGGACAGAA GACTGCTGGC ATGACAATTA CATTGACGCA CCGGTGAACG GAGAGGCGTG GGAGGAAGAA AATGGAGGTG ATTGTGCCAA CCGGGTTGCG CGCGGGGGTT CCTGGTACTT CCACAGAGGG GATCTGCGTG TCGCTTTCCG TTTTATCAAC AACCCAGCCA TGCGCTATAG TCTGATGGGT TTTCGGCTTG CACAGGATTT GCCTTAA
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Protein sequence | MRIRNRFSLL FVSACLVLSA CAEQESYTSS TSDRTQQVAG TAYRACDNCP EMIVVPAGSF LMGSPASEEG RSEAEGPQLK VTLAKVFAMG KHEVTRGQFR AFVDATGYLT QAEVEADRGC LTLDVRDDGN GNWGWSANQN WRNATLYGLE QGSDAHPVLC VSQQDALAYI TWFNETHLPP DERAYRLPTE AEWEYAARAG SSTTYSHGTD VTAMCRYGNI GDQTALPKGH AWPEWVTCDD GYVFTAPVGS FQANAFGLHD MHGNVWEWTE DCWHDNYIDA PVNGEAWEEE NGGDCANRVA RGGSWYFHRG DLRVAFRFIN NPAMRYSLMG FRLAQDLP
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