Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3967 |
Symbol | |
ID | 3967271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4999499 |
End bp | 5000359 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637923064 |
Product | F0F1 ATP synthase subunit gamma |
Protein accession | YP_529434 |
Protein GI | 90023607 |
COG category | [C] Energy production and conversion |
COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0127886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.423609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCG GTAAAGAAAT ACGTACCCAA ATAGGTAGTA TCAAAAATAC GCAAAAGATT ACCAGTGCAA TGGAAATGGT AGCGGCCAGT AAAATGCGTC GCGCCCAGGA CCGCATGGAA CTAGGTAAGC CCTACGCCAG CCGCATGCGC GCTGTTGTTG GCCACTTAGC CAATGGTAAT CCAGAGTATA AGCACCTTTA TCTGCAAGAG CGTGAAGTTA AACGAGTCGG TTACATCATC GTATCCTCAG ACCGCGGTCT GTGTGGTGGC TTAAACGTTA ACGTGTTTAA GCAAGTTATC GTCCACAGTA AAGCGTGGGC CGATAAAGGC GTTGGTGTAG ACCTGTGCAT GATCGGCGCA AAAGGTACTT CGTTCTTTAA TTCCGTGGGC GGCAACATCG TTGCAAGCGT GCGTGATATA GGCGAAAAAC CCAAGGTATC CGATTTGATT GGCAGCGTTA AAGTTATGCT AGATGCGTTT GCCGAGCAGA AAATCGACAA GCTTTACTTG GTAGGTAACG AGTTCGTGAA CACTATGACT CAATTACCAT CGGTAGAGCA ACTTCTGCCT TTACAGCCAG ATGAAGACAA AAAATTACAG CACCAATGGG ATTACATCTA TGAGCCCGAA GCACGCGAAT TGCTAGACGG TTTATTGGTG CGTTACATCG AATCTCAGGT GTACCAGGCC GTAGTAGAAA ACGGCGCATG TGAGCAAGCT GCACGAATGA TCGCGATGAA AAACGCCACC GATAATGCCG GTGACTTAAT CGACGGTTTG CAGTTGGTTT ACAACAAAGC GCGCCAAGCA GCTATTACAC AAGAACTGTC AGAAATCGTA AGCGGCGCAG CCGCGGTGTA A
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Protein sequence | MASGKEIRTQ IGSIKNTQKI TSAMEMVAAS KMRRAQDRME LGKPYASRMR AVVGHLANGN PEYKHLYLQE REVKRVGYII VSSDRGLCGG LNVNVFKQVI VHSKAWADKG VGVDLCMIGA KGTSFFNSVG GNIVASVRDI GEKPKVSDLI GSVKVMLDAF AEQKIDKLYL VGNEFVNTMT QLPSVEQLLP LQPDEDKKLQ HQWDYIYEPE ARELLDGLLV RYIESQVYQA VVENGACEQA ARMIAMKNAT DNAGDLIDGL QLVYNKARQA AITQELSEIV SGAAAV
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