Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3966 |
Symbol | |
ID | 3967270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4998034 |
End bp | 4999446 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637923063 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_529433 |
Protein GI | 90023606 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000531769 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.214208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCG GACGTATCGT ACAAATCATC GGCGCTGTAA TTGACGTGGA ATTCCCACGC GACTCAGTGC CAAAGGTTTA CGACGCTTTA ACCGTCGCAG ACAAAGGCCT CACCCTTGAA GTACAGCAAC AGCTCGGCGA CGGCGTTGTT CGTGCAATTG CAATGGGTGG TTCTGAGGGT GTTAGCCGCG GCCTAGCCGT AGAAAACACT GGTGCACCAA TCAACGTACC TGTTGGTACT GCGACTCTTG GCCGCATCAT GGACGTATTG GGTAACCCTA TCGATGAAAA GGGCCCAATC AACGAAACAG AACGTGCTTC TATCCACCGC AAAGCACCAA AATATGACGA GCTTGCGGCA TCTGAAGAAC TACTAGCAAC CGGTATTAAA GTTATCGACC TAGTATGTCC TTTCGCTAAG GGTGGTAAAG TTGGTCTGTT CGGTGGTGCC GGTGTGGGTA AAACCGTAAA CATGATGGAA TTGATCAACA ACATCGCAAC CGAGCACAGC GGTTTATCCG TATTTGCTGG TGTGGGTGAG CGTACTCGTG AAGGTAACGA CTTCTACTTC GAGATGCAGG AAGCCGGCGT TGTAAACGTT GATAAATTCG ACGAATCTAA AGTGGCCATG GTTTATGGTC AGATGAACGA GCCACCTGGA AACCGTTTGC GCGTAGCATT GACTGGTTTG ACCATGGCTG AAAAATTCCG TGACGAAGGT AAAGACGTAC TGTTGTTCGT AGACAACATC TACCGTTACA CCTTGGCGGG GACCGAAGTA TCTGCACTGT TGGGCCGTAT GCCTTCAGCG GTGGGCTACC AGCCTACTCT TGCTGAAGAA ATGGGTGTGC TTCAGGAGCG TATTACTTCA ACCAAGACTG GTTCTATTAC TTCTATCCAA GCGGTATACG TACCTGCGGA TGACTTGACT GACCCATCGC CAGCTACCAC CTTTGCTCAC TTGGATTCAA CCGTTGTATT GAGTCGTGAT ATTGCAGCAA AAGGTATCTA CCCTGCTATC GACCCATTGG ATTCTAGCTC ACGTCAGCTA GACCCATTAA TCATCGGTCA AGAGCACTAC GATACTGCGC GTGGCGTACA GTCTGTTCTT CAGCGCTACA AAGAACTGAA AGATATTATT GCCATTTTGG GTATGGATGA ATTGTCTGAA GAAGATAAAT TAACCGTATC TCGTGCACGT AAAATCGAAC GTTTCTTATC TCAGCCATTT AACGTTGCAA AAGTATTTAC CGGTCAAGAC GGTAAAATCG TATCGCTTAA AGACACCATC TCTGGCTTCC AGGGCTTGTT GAGCGGGCAA TACGACGACT TACCTGAGCA GGCGTTCTAC ATGGTTGGCT CTATCGATGA AGCAATCGAA AAAGCCAAGA AAATGAAAGA GAAAGCAGCG TAA
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Protein sequence | MSSGRIVQII GAVIDVEFPR DSVPKVYDAL TVADKGLTLE VQQQLGDGVV RAIAMGGSEG VSRGLAVENT GAPINVPVGT ATLGRIMDVL GNPIDEKGPI NETERASIHR KAPKYDELAA SEELLATGIK VIDLVCPFAK GGKVGLFGGA GVGKTVNMME LINNIATEHS GLSVFAGVGE RTREGNDFYF EMQEAGVVNV DKFDESKVAM VYGQMNEPPG NRLRVALTGL TMAEKFRDEG KDVLLFVDNI YRYTLAGTEV SALLGRMPSA VGYQPTLAEE MGVLQERITS TKTGSITSIQ AVYVPADDLT DPSPATTFAH LDSTVVLSRD IAAKGIYPAI DPLDSSSRQL DPLIIGQEHY DTARGVQSVL QRYKELKDII AILGMDELSE EDKLTVSRAR KIERFLSQPF NVAKVFTGQD GKIVSLKDTI SGFQGLLSGQ YDDLPEQAFY MVGSIDEAIE KAKKMKEKAA
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