Gene Sde_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3941 
Symbol 
ID3967206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4966856 
End bp4967242 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content45% 
IMG OID637923038 
ProductMerR family transcriptional regulator 
Protein accessionYP_529408 
Protein GI90023581 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.708141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG GCGAAGTAAC CGCAGAGCTA GGTATAAGCG TAGATACATT ACGCTATTAC 
GAAAAAATAA ATCTACTAAC AAATATTAAG CGCGGTGCGG CTGGGCAGCG CGAATATACC
GCTGCCGATA TGGCGCGCGT AAGGTTTATA AAGCGCGCTC AGAAAATGGG TTTTAGTTTA
GACGATATAG CCAGCCTACT GGCTTTTAGG GATGCGCCTG CGCAAAGTAA ACCCATGGTG
CGCAATATGG TGGCAGAAAA GGTCACAGAA ATTAATCATC AGCTTCAAGA GCTAAGCGCC
CTGCGCGATG AGCTAACGGC GCTTACTGCT GCCTGTGAAA TAACGGAAGA CAACTGCCCT
ATTCTCGATA ATTTCAATAA AAAATAA
 
Protein sequence
MKIGEVTAEL GISVDTLRYY EKINLLTNIK RGAAGQREYT AADMARVRFI KRAQKMGFSL 
DDIASLLAFR DAPAQSKPMV RNMVAEKVTE INHQLQELSA LRDELTALTA ACEITEDNCP
ILDNFNKK