Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3837 |
Symbol | |
ID | 3966948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4836982 |
End bp | 4837881 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637922934 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | YP_529304 |
Protein GI | 90023477 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0373903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAA CCCGCAAATC CACTCGGCCA TCCAAACCAC TTAAAGCTAC CCTTGTGGCT TATGCAAAAC TTATGCGCTT AGATAGGCCC ATAGGTATTT ATTTAGTGCT CTGGCCTACA CTGTGGAGCC TGTGGATAGC CGCAGATGGT TTGCCCGATT GGGATGTGTT GGTTATTTTT GTGCTGGGTG TAGTGCTTAT GCGGTCTGCA GGCTGTGTAA TTAACGATTT TGCCGACCGC AAGATAGACG GCCATGTGCG TCGCACAGCA AACCGCCCCC TAGTTACTGG GTTAATAACC CCCAAACAAG CGGTGCTATT TTTTGTGGCA TTGCTGGTTA TTGCGTTTAT TTTGGTGCTA TTTACCAACC CACTTACCAT AAAGCTTTCG TTCGGCGGGG CGCTACTAGC CTTTTGCTAC CCCTTTATGA AACGCTACAC CCAGTTGCCA CAAATAGTGT TGGGTGCCGC TTTTGCGTGG TCTATTCCTA TGGCCTTCGC CGCACAAACC AACCAGCTAC CCGAAGCCAT TTGGGTGCTA TATACCGCTG TTGTACTGTG GACAGTGGCC TACGACACCT TCTACGCAAT GGCAGACAGA GAAGACGATT TAAAAATTGG GGTGAAGTCC ACCGCTATCC TATTTGGCGA TCAAGATCGC ATCATAACCG CCTGTTTGCA GCTAATGGCA CTGGTGGCTA TGGCCATGGC AGGGGAGCGC TTTGGGCTAG GCTTTAGCTT TAAGGTGTCT TTATTGGTTG CAGGTGGTCT TTTTGCCTAT CAACAATATT TAATTCGCAA CCGCGAACCG AACGCGTGTT TTCGTGCATT TTTGCATAAC AATTGGGTAG GTTTAGTGGT TTTTCTCGGC ATTTTGGTGG ACAAGCTCAT AACAAACTAA
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Protein sequence | MTATRKSTRP SKPLKATLVA YAKLMRLDRP IGIYLVLWPT LWSLWIAADG LPDWDVLVIF VLGVVLMRSA GCVINDFADR KIDGHVRRTA NRPLVTGLIT PKQAVLFFVA LLVIAFILVL FTNPLTIKLS FGGALLAFCY PFMKRYTQLP QIVLGAAFAW SIPMAFAAQT NQLPEAIWVL YTAVVLWTVA YDTFYAMADR EDDLKIGVKS TAILFGDQDR IITACLQLMA LVAMAMAGER FGLGFSFKVS LLVAGGLFAY QQYLIRNREP NACFRAFLHN NWVGLVVFLG ILVDKLITN
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