Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3835 |
Symbol | |
ID | 3966946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4835138 |
End bp | 4836415 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922932 |
Product | excitatory amino acid transporter |
Protein accession | YP_529302 |
Protein GI | 90023475 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0012663 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAGC TAAAACTTCA CTGGCAAATT CTTATCGCTA TTGCAGCCGC ATTTTTGGTG GGGGGCGTAG TCAATTTTGC TGGCGATGCC ACCTGGGCAA AGGCCATTGT GAATGCCGGT GAATTTATAG GCACATTTTT TCTTAACGCG TTAAAAATGA TTATTGTGCC GCTGGTACTG TCGTCCATTA TTTGCGGCGT AGCGGGCATG GGTAAAGGGG CAGATCTAGG GCGCTTGGGC GCAAAGGCAT TAAGCTTTTA TGCGCTTAGC AGCACCATAG CCATTTTGGT TGGCTTGCTG GTGGTAAACG TGATGACGCC GGGTGAAATT AACGGTGAGC CGGCGCGCGA TCAATTAAAC CTTAGCTCTA CCGAGCAAGT AGACCAGCAG TTAGCCAAAG TAGAAGGGCG CGGTTTGGGT GATGTAGCTG CCGTATTTTT GCGCATGGTA CCGCCCAATT TGGTCGAGGC GGCTGCCGAA GGGCAAATGC TGGGGCTAAT TACTTTTGGT TTGTTGTTCG GCTTTTTTAT GGTGCGCGTG GCACCGGCGG CCAGCGAGAC GTTAATGAAT TTTTGGACCG GCGTTTCTGA GGTGATGATG AAAATCACCA TGCTGGTAAT GAAATTTGCC CCGCTGGGGG TGTTTGGCTT GGTTACGGTT ACTATTGCTG GTACCGGGTT GGAAATTTTG GCCAACTTGG CAGTGTTCTT TTTTACCGTC ACCTTTGCAC TTGCCATACA CGTACTGGTT GTTATGCCGC TGTTACTGCG TTATTTGGGA GGAGTGAAAA ACCCTTACCG CCAAATTGCG TTTATGGCGC CGGCCCTGCT TACTGCTTTT TCGACTGCAT CGTCTTCGGG CACGCTGCCA TTAACAATGG ATTGTGTAGA GAAAAACGCT GGGGTATCTA AGCGCACCAG CTCGTTTGTT TTACCCTTGG GCGCAACCAT TAACATGGAC GGCACCGCAT TGTATGAGTG TGTGGCAGCC ATGTTTATTG CACAGGCGTA CGGTTTAGAT TTAACCATTG GTGTGCAATT TACCATTGTG CTTATTGCGC TGCTCACCTC TATTGGCGTT GCCGGCATAC CCTCTGCAAG CCTTATGGCT ATTACGGTTA TTCTTACCGC TGTAGGCTTA CCCTTAGAGG GCATTGGCTT ACTACTGGTT ACCGATAGAA TTCTGGATAT GATGCGCACC GCCGTAAACG TATTTAGCGA CAGCTGCTGC GCAACAATTA TAGCCAGAAC CGAAGGCGAA AAAACTAACT TCGAATAA
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Protein sequence | MLKLKLHWQI LIAIAAAFLV GGVVNFAGDA TWAKAIVNAG EFIGTFFLNA LKMIIVPLVL SSIICGVAGM GKGADLGRLG AKALSFYALS STIAILVGLL VVNVMTPGEI NGEPARDQLN LSSTEQVDQQ LAKVEGRGLG DVAAVFLRMV PPNLVEAAAE GQMLGLITFG LLFGFFMVRV APAASETLMN FWTGVSEVMM KITMLVMKFA PLGVFGLVTV TIAGTGLEIL ANLAVFFFTV TFALAIHVLV VMPLLLRYLG GVKNPYRQIA FMAPALLTAF STASSSGTLP LTMDCVEKNA GVSKRTSSFV LPLGATINMD GTALYECVAA MFIAQAYGLD LTIGVQFTIV LIALLTSIGV AGIPSASLMA ITVILTAVGL PLEGIGLLLV TDRILDMMRT AVNVFSDSCC ATIIARTEGE KTNFE
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