Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3817 |
Symbol | |
ID | 3966891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4819612 |
End bp | 4819830 |
Gene Length | 219 bp |
Protein Length | 72 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922914 |
Product | XRE family transcriptional regulator |
Protein accession | YP_529284 |
Protein GI | 90023457 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00145193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAAAAA CCAATATTGT AAACACCATT CGTACACAGC GGTTTATGGC AGGAGAGATG ACCCAGCAAC AACTGGCTGA GCTAGTTGGG GTAACCCGTC AAACCATTAT TGCCATAGAG GCTAATCGCT ACGCGCCGTC TTTAGAGTTA GCTTTTAAAA TTGCGCAGGC ATTTAACCTA CCCTTGGAAG AGGTGTTTCT GCCTCCTGAA CGTGAATGA
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Protein sequence | MPKTNIVNTI RTQRFMAGEM TQQQLAELVG VTRQTIIAIE ANRYAPSLEL AFKIAQAFNL PLEEVFLPPE RE
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