| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3805 |
|---|
| Symbol | |
|---|
| ID | 3966879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4805169 |
|---|
| End bp | 4806488 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637922902 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_529272 |
|---|
| Protein GI | 90023445 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGC AAGCGATGGC ACCTAATGAC TGCAGTAGTG TAACACTACT ATTTGTAGAT
GATGAATTGC CAATATTGAA AGCGTTTAAA CGTTTAGTGC GTGGCAAAAA CTGGACAGTG
TATTGTGCAG AGTCTGCGCA GCAGGGTATA CAAATACTTA GCCAAAATAA TGTCGATATT
GTGGTTTCAG ATATGCGTAT GCCAAACATG AATGGCGCGC AGTTTTTATC TTATGTGCGA
GATAACCACC CACAGGCACA GCGTATTCTT ATTACCGGCT ATAGCGATTT ACAGTCGCTT
CAATCGGCCA TCAATGAGGC AAAAATATCT AATTATATAT CTAAGCCCTG GGAGGATGAG
GCGTTACTGG ATGTGCTACA AAAAACAGTG GATATTCAGG AGGGTGAAAA AGAACGTCGT
CGTTTAGAGC TAGTAAAAAA GTCTCAAAAT AAAAAGCTTG GGCGGTTGGC GTTAAGTTTA
AATAGCCAAG TGAACGAAAA GTCGATGGAG GTGAATCAAG CATTAACCCT ACTGGAAATG
GAGCGCAACC ATGCACAAAT GCGCGTGCAT GAACTAACTC ACGCGGTGCT TAAATTATTA
GGGTTAAGTG GTAAGGGGCG GTCTTACGGT GCCTTTATAG CCGAAAGCGC AACAGCGGTA
GGTCGGGCCA TAGGTTTATC GGCGCTTGAG CTAGAAAATT TATATATCGC AGCTGCATTA
CATAATATTG GCTACTTGGT GTTAGGCGAG AGGGAGATGA TAGAGGATGC GAACGAACAG
GAAAATGAGC ATTCCGAGCA ATATAAGGCT CAAGTAGCAA TTAGTGAGGA AATCCTCAAT
GGGATGCCTG CTTTGGCGCC GGTTGCTTCA ATTATTGCTA CTCATAAAGA GCGTTTAAAT
GGCACAGGCT TCCCCAACAA ACTGAAGGCG GAGCAAATCC CAATGCCGGC AAGAATTTTG
GGGGTAGTAA GCGATTATGT TCAGCTGCAT CGCGGGCGTA TGTGCTCTGG GGTAGAGGGC
CATGCAATGG CGCGTAAATA TATCGAATCT CGCATTGCAT GGCATTACGA CATAGCCGTG
GTGAAACATT TTTTTGAGCA AGTAGATGAT GCAGCACTCA ACTATATTTC TACTATACTT
GCCTCAGAGG TGCATGAGTT GCAGCCAGGT ATGATTCTGG CTAATGACAT ACGCACCCAC
AATAAGGTTT TACTGCTGCC TGCAGGGGTA AAACTGAATC AAAATCAAAT TAACAAAATT
GAACTCTATG AACGCTTTGC TAAAACAAAG TTAATAGTGA ATATTGTTAA TACAAGCTAA
|
|---|
| Protein sequence | MAKQAMAPND CSSVTLLFVD DELPILKAFK RLVRGKNWTV YCAESAQQGI QILSQNNVDI
VVSDMRMPNM NGAQFLSYVR DNHPQAQRIL ITGYSDLQSL QSAINEAKIS NYISKPWEDE
ALLDVLQKTV DIQEGEKERR RLELVKKSQN KKLGRLALSL NSQVNEKSME VNQALTLLEM
ERNHAQMRVH ELTHAVLKLL GLSGKGRSYG AFIAESATAV GRAIGLSALE LENLYIAAAL
HNIGYLVLGE REMIEDANEQ ENEHSEQYKA QVAISEEILN GMPALAPVAS IIATHKERLN
GTGFPNKLKA EQIPMPARIL GVVSDYVQLH RGRMCSGVEG HAMARKYIES RIAWHYDIAV
VKHFFEQVDD AALNYISTIL ASEVHELQPG MILANDIRTH NKVLLLPAGV KLNQNQINKI
ELYERFAKTK LIVNIVNTS
|
|---|
| |