Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3797 |
Symbol | |
ID | 3966871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4796478 |
End bp | 4797158 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637922894 |
Product | undecaprenyl-phosphate galactosephosphotransferase |
Protein accession | YP_529264 |
Protein GI | 90023437 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.823978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAA CTCATTATAC ACGAAAAAAT AGTCTGCATT TTATAGCTGA AATTATTGGT TCCGCTCTGG GTAGAAGCAG CGATGCCGGT TTGCCAGTTT GGTTGCAACA GCTAGGTGCG CTACTGGGTG TGATAGCACT ATCGCCATTA TTATTAACCG TGTACGTATT AATTAAATGG GAAAGTGCCG GCCCAGTTGT TTTCAAGCAG GTGCGTGTAG GTAAGCACGG TCGCACTTTT ACCTTATATA AGTTTCGCTC TATGTATATG GCAAACGATG CTCGCTACGT AGACCCTGCC AGCCTCGCTA GCGATAGAGA CGGTGTGTGT AAAAAATATT TTCAAGATCC GCGCATTACC CGTGTAGGAA AGTTTATTCG TAAATACTCA ATTGATGAAT TGCCCCAGCT GTGGAATGTT GTGCGCGGTG ATATGGTACT AGTAGGGCCT CGTCCTGCCT TACCTAGCGA AGTGGCCGAA TACGACTTTA AAGCTAAGCG CCGTTTGCAG GTTCGCCCTG GGTTAACTGG CTTGTGGCAG GTTTCGGGTA GAGCCAATAC CACATTTGAA CAACAAATAG CATTAGATTC AAAATATGTA GCAGAAAAAT CTTTAAGGAT GGATTTAAAA ATACTATTGC TTACGTTGCC TGCAGTGGTA TCCGCAAAAG GTGCTTATTA A
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Protein sequence | MNTTHYTRKN SLHFIAEIIG SALGRSSDAG LPVWLQQLGA LLGVIALSPL LLTVYVLIKW ESAGPVVFKQ VRVGKHGRTF TLYKFRSMYM ANDARYVDPA SLASDRDGVC KKYFQDPRIT RVGKFIRKYS IDELPQLWNV VRGDMVLVGP RPALPSEVAE YDFKAKRRLQ VRPGLTGLWQ VSGRANTTFE QQIALDSKYV AEKSLRMDLK ILLLTLPAVV SAKGAY
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