Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3791 |
Symbol | |
ID | 3966865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4789454 |
End bp | 4790407 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637922888 |
Product | cell wall biosynthesis glycosyltransferase-like protein |
Protein accession | YP_529258 |
Protein GI | 90023431 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCAC TAGAAAAAAC AATTACAGTT GTTATTCCCC TTTATAACAA AGCTGCACAT ATTGTTGATA CGCTTAAATC AATATTGCGA CAAACTACAC TACCAGAAGA AATTATTATT GTTGACGACG GTTCTACCGA CAACAGTGTA AAAACATTAG AAAGCTTTTT GGCTGGTGTA CGAGCAAGGT GTGACATACG TATCATTAAA CAGAAAAATG GTGGCGTTTC GAAGGCGAGA AATACCGGTA TACAACACGC GAAAAGTAAT TTTATTGCGC TATTAGATGC AGATGACAGT TGGGCGCCAG ATTATTTAGC CGAAATTAAG GTGTTAATGG GCAGCTTTCC CGATGCCGGA GCCTATGCTA CTAACTACTA TAAGTTAGAG GGCGATAAAT TTATTGTTCC AAAAATACGG TTTACCAAAA ATGGCAAACA TACAGGTATT ATGGATGATT ATTTCGAGAT TGCGGCACGT GGTGATTTAC CCTTTATGAC ATCGTCAATC TGTATTCGTC GCTCTGTGCT ATTGTACTTA GGTGGCTTTC CAGAGGGGGA GCCAATGGGA GAGGATCAAG ACGTTTGGGC TAAATTAAGT TTAGAAAGCT CAATTGCCTA TAGTCATAAG CGAGTATCGC ACTACCATTT GGATGCAACT AATCGTGCGT GCAACAGTAA TGCACCTAAA GAAGAGTGCC CATTTAGCAA ACGTTTAAAA ATGGCGGTAC AGGTCAACCA GGTTAAACCA AGCTTAAGGC GTCATGTGCT TGCTTATACA GCTACCCATC TATTGCATCT TGCTAAACAA CAAATAGAAT TAGGGGGCTT TACAGAGGCA GAAAATTTAC TCGCGGATGA ACGTTGTAGC TTACTTATGC TTAAAAAATT GCGACTAAAA ACTAAATTAG CGGCGTACAA AATGCGCGGC TTGGTAGGGC GTTTGGTGGC TTAA
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Protein sequence | MSALEKTITV VIPLYNKAAH IVDTLKSILR QTTLPEEIII VDDGSTDNSV KTLESFLAGV RARCDIRIIK QKNGGVSKAR NTGIQHAKSN FIALLDADDS WAPDYLAEIK VLMGSFPDAG AYATNYYKLE GDKFIVPKIR FTKNGKHTGI MDDYFEIAAR GDLPFMTSSI CIRRSVLLYL GGFPEGEPMG EDQDVWAKLS LESSIAYSHK RVSHYHLDAT NRACNSNAPK EECPFSKRLK MAVQVNQVKP SLRRHVLAYT ATHLLHLAKQ QIELGGFTEA ENLLADERCS LLMLKKLRLK TKLAAYKMRG LVGRLVA
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