Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3781 |
Symbol | |
ID | 3966855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4781783 |
End bp | 4782115 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637922878 |
Product | ArsR family transcriptional regulator |
Protein accession | YP_529248 |
Protein GI | 90023421 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00283923 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCTG TACAGCTATT TAAATGCCTT GCGGACGAAA CCCGTTTGCA CTCCACGCTG CTTATATATG CCCATAAAGA GCTTTGTGTG TGTGAATTGG TAGAGGCCTT AGACCTAAGC CAGCCGAAAA TATCGCGTCA CTTAGCGCAA TTGCGCGAAT GCGGAGTATT AAGTGATAGA CGCCAAGGGC AGTGGGTGTT TTATGCCATA AACCCGCAAT TGCCACCCTG GGCCCTCAGC ATCATTGCCC AGGCTCACAC TGCAGAGCAG GCTACCCTTA CAACCCTTTC CCAAAAGCTC GAGGCCATGT GTTGCAGGCC CAACCGCTGT TAA
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Protein sequence | MHPVQLFKCL ADETRLHSTL LIYAHKELCV CELVEALDLS QPKISRHLAQ LRECGVLSDR RQGQWVFYAI NPQLPPWALS IIAQAHTAEQ ATLTTLSQKL EAMCCRPNRC
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