Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3780 |
Symbol | |
ID | 3966835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4781259 |
End bp | 4781762 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637922877 |
Product | protein tyrosine phosphatase |
Protein accession | YP_529247 |
Protein GI | 90023420 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0223758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT TATTTATTTG TACCCACAAT CGCTGTCGCA GTGTGCTTGG CGAAGCCATT ACCAATCACA TTGGCCAAGG CCGTTTACAG GCGCGCAGCG CGGGCAGCCA GCCGGTGGGC GAAGTGCACC CACTAAGCCT GCAGTTTTTA ACCGAGCGCG GTATTAGTAC CGAAGGCTTA TGTAGTCAAA GTTGGGATGA GCACGAAGAT TTTGCGCCCG ATGTAGTGTT TACCGTATGC GATAGCGCAG CCGCAGAAAG TTGCCCTGTG TGGTTTGGCA ATAGCATCAA AGTGCACTGG GGTTTGCCAG ACCCATCTAA ATTAGAAGGC AGTGATGAAA AAATGCGCGC ACTCTTTTTT GCAGTAATGG ATGTAATAGA AGCGCGTGCG CATAAATTAC TAGAGCTAGA TAAAGCCCTA TTAAGCGACG AAGAGTTAGA AGCGCGCTTA AAAGATATAG AGCAGCAAAT ACCGGCACCA AACTTGGCTG AGGTAATCAT CTAA
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Protein sequence | MKILFICTHN RCRSVLGEAI TNHIGQGRLQ ARSAGSQPVG EVHPLSLQFL TERGISTEGL CSQSWDEHED FAPDVVFTVC DSAAAESCPV WFGNSIKVHW GLPDPSKLEG SDEKMRALFF AVMDVIEARA HKLLELDKAL LSDEELEARL KDIEQQIPAP NLAEVII
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