Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3779 |
Symbol | |
ID | 3966834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4780243 |
End bp | 4781259 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922876 |
Product | arsenical pump membrane protein, putative |
Protein accession | YP_529246 |
Protein GI | 90023419 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
TIGRFAM ID | [TIGR00832] arsenical-resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.567439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTTGT TTGAACGTTA CTTAAGTGTT TGGGTAGGCC TGTGCATTGT AGCTGGTGTA GGCCTTGGCT ATGTAATGCC GAGTGCGTTT AGCGCAATTG CTCACTTAGA AGTGGCCCAC GTAAACATTC CCGTGGCGAT TTTTATTTGG GTAATGATTT ACCCCATGAT GATACAAGTG GATTTTGCAT CCATTAAAGA TATTGGCAAA AAACCTAAAG GTTTAGTGTT AACACTATTA ATCAATTGGC TTATTAAACC GTTCACAATG GCGGCGTTGG GCTGGTTGTT TTTTAAAATA CTGTTTGCCG ATTTAGTCGA CCCCGCCACC GCAAGTGAAT ATATAGCGGG TATGATTTTA CTGGGTGTAG CGCCATGTAC CGCTATGGTA TTTGTATGGA GCCAATTAAC CAAAGGCGAT GCAAATTATA CGCTGGTACA AGTATCGGTT AACGATGTGA TTATGATTTT TGCCTTTGCG CCTTTGGCCG CGTTTTTATT AGGCGTAACC GATATTACTG TGCCGTGGGA AACGTTGCTG CTATCGGTTT TACTCTATGT GGTATTGCCA CTGGTTGCAG GCATAGCTAC ACGCAAAGCA CTGGATGCAG CAGATAATCA CACTCGCTTA AATAATTTTG TGGGCATGTT AAAGCCATGG TCGATTGTGG GCTTGCTCGC AACCGTAGTG TTGCTGTTTG GTTTTCAAGC CAACACTATT TTAAGTGAGC CTATGGCAAT AGTGCTTATC GCCATCCCTT TGCTTATTCA AACCTACGGC ATTTTTGCAA TCGCTTACGC AGGCGCAAAA TGCTTAAAGC TGCCCCACAA TATTGCCGCA CCGGCATGCA TGATTGGTAC ATCTAACTTT TTCGAACTGG CGGTAGCGGT GGCCATTTCA TTGTTTGGTT TGCATTCTGG CGCAGCCTTG GCAACGGTAG TGGGCGTATT GGTAGAAGTG CCAGTGATGT TAAGCCTGGT TGCTTTTGCC AACCGTACTC GTCATTGGTT TGATTAA
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Protein sequence | MGLFERYLSV WVGLCIVAGV GLGYVMPSAF SAIAHLEVAH VNIPVAIFIW VMIYPMMIQV DFASIKDIGK KPKGLVLTLL INWLIKPFTM AALGWLFFKI LFADLVDPAT ASEYIAGMIL LGVAPCTAMV FVWSQLTKGD ANYTLVQVSV NDVIMIFAFA PLAAFLLGVT DITVPWETLL LSVLLYVVLP LVAGIATRKA LDAADNHTRL NNFVGMLKPW SIVGLLATVV LLFGFQANTI LSEPMAIVLI AIPLLIQTYG IFAIAYAGAK CLKLPHNIAA PACMIGTSNF FELAVAVAIS LFGLHSGAAL ATVVGVLVEV PVMLSLVAFA NRTRHWFD
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