| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3757 |
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| Symbol | |
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| ID | 3966792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4756827 |
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| End bp | 4758191 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922854 |
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| Product | C4 dicarboxylate ABC transporter permease |
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| Protein accession | YP_529224 |
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| Protein GI | 90023397 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAGT ATCTTCCGTT AATCATGTTC GGCGTAGTAT GCGCCGTGCT GATGCTGGGC
TACCCAGTTG CATTCACCCT TGCGGGCGTA TCGTTAATAT TTGCCGGCAT CGGCATTTAC
GCCGGAATAT TTGAGCTACA GGAGATGCTC GCCTACACCG AGCGCGCCTA CGGCATAATG
ACCAACACAT CACTTATAGC CGTGCCCATG TTTATTTTTA TGGGGGTAAT GCTAGAGCGC
TCTAAAATTG CCGAGGCACT GCTGCACAAC CTCGCTCACG CCTGCGGCCG CGCACCTGCG
GGCCTGGCCA TTTCGGTAGT GCTGGTAGGC ACGCTTATGG CTGCCAGCAC CGGCATAGTA
GGCGCCACGG TTGTTACCAT GGGGCTTATG TCGCTACCCA CCATGTTAAA GCGCGGTTAC
GACCCCGCAT TAGCCTGCGG CACCATTTGT GCAACTGGCA CTTTAGGGCA AATTATTCCC
CCTTCTATTG CACTGGTATT ACTGGGCGAC GTGCTATCGA GCGCGTATCA ACAAGCGCAG
CTTAATTTAG GGGTATTTAA CGCTACACCT ATTTCAGTTG GAGATTTGTT TATTGGCGCC
ATGGTGCCCG GCATTGTGCT GGTACTACTC TATTTGCTGT ACTTGGCGTG GATAGGTGTA
TTTAAACCTG AGCTCGCACC GCCCAACCCA GATGACACGC CGCCGCCGGC TAGCGAGCTA
ATTAAAAGTA TTGTGCCCCC CATTTTGCTC ATGGTTTTAG TGCTGGGTTC TATTATTACC
GGCCAAGCCA CACCAACCGA AGCCTCTGGC GTTGGCGCAC TAGCGGCCAC ACTACTTGCC
GTTGCACGCA GGCAATTTAG CTTAAAAGCC TTGGCATCGG TTGTGCGGTC CACCGCCAAG
GTGACCACCA TGGTATTCGC CATTTTGCTG GGCTCGGCTT TATTTTCTTT AGTGTTTAGA
GATTTAGGCG GCGAACAATT AATACACGGG TTTTTCCACG ATTTGCCCGG CGGCACCTTT
ATGGCGGTGC TTATTGTAAT GCTGGTCATT TTTTTGCTTG GTTTTATTCT AGACTTTATA
GAAATAACGT TTGTTGTGGT GCCAATTATT GCACCCACAC TGCTTATGAT GGGCGTAGAC
CCCATATGGC TAGGCATAAT GATTGCCATA AACCTACAAA CGTCATTTTT AACACCGCCT
TTTGGCTTTG CATTATTTTA TTTACGCGGT GTAGCGCCCC AAACAGTTGC AACCTCTGCA
ATATATAAGG GCGTTATTCC GTTTATTATT TTACAAGTAC TGTTAATGGT ATGCTTGGCG
CTTTGGCCCA GCTTGGCAAC ATGGTTGCCC AATCTATTAC GCTAA
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| Protein sequence | MLEYLPLIMF GVVCAVLMLG YPVAFTLAGV SLIFAGIGIY AGIFELQEML AYTERAYGIM
TNTSLIAVPM FIFMGVMLER SKIAEALLHN LAHACGRAPA GLAISVVLVG TLMAASTGIV
GATVVTMGLM SLPTMLKRGY DPALACGTIC ATGTLGQIIP PSIALVLLGD VLSSAYQQAQ
LNLGVFNATP ISVGDLFIGA MVPGIVLVLL YLLYLAWIGV FKPELAPPNP DDTPPPASEL
IKSIVPPILL MVLVLGSIIT GQATPTEASG VGALAATLLA VARRQFSLKA LASVVRSTAK
VTTMVFAILL GSALFSLVFR DLGGEQLIHG FFHDLPGGTF MAVLIVMLVI FLLGFILDFI
EITFVVVPII APTLLMMGVD PIWLGIMIAI NLQTSFLTPP FGFALFYLRG VAPQTVATSA
IYKGVIPFII LQVLLMVCLA LWPSLATWLP NLLR
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