Gene Sde_3752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3752 
Symbol 
ID3966787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4751060 
End bp4751941 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content47% 
IMG OID637922849 
Productphosphate transporter ATP-binding protein 
Protein accessionYP_529219 
Protein GI90023392 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.600965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAC TAGATACACT GGAAAGAGTA GAAACGGCAG AAATAGAGAA GCCCATAATG 
CAAGATAAAC AAATAGCGCG CGGCGTAGAA AAAATTACCA AAACCGTGGG GGTGCCCCTT
ACGGAAAACG CCAAATTTGG TATTCGCGGT GTAGATGTGT TCTACGGCGA GAAGCAGGCC
GTATTTAACG TAGATTTGGA TATAGCCAAA AACCAAGTTA TCGCAATGAT TGGGCCTTCG
GGCTGCGGTA AGTCTACCTT TTTGCGCTGC TTAAATCGCA TGAACGACAC CATCGATATC
TGCCGTGTTT CGGGTAGCAT CACTTTGGAT GGCATGGACA TTTACGATAA GCAACTCGAC
GTAGTGCCAT TGCGTGCACG TGTGGGCATG GTGTTCCAAA AGCCCAACCC GTTTCCAAAG
TCTATTTACG AAAATGTGGC CTACGGCCCC AAGATTCACG GCCTTGCTAG TCGTCGCTCA
GACTTAGACG AAATAGTAGA AACCAGCTTG AAAAAAGCGG GCTTGTGGAA TGAGGTTAAA
GACCGTCTTC ACGCGCCAGG AACGGGCTTG TCCGGCGGTC AGCAACAGCG TTTATGTATT
GCACGTACCA TTGCGGTAAG CCCAGAAGTT ATTCTTATGG ATGAGCCTTG TTCCGCGCTA
GACCCTATTG CAACAGCTAA AATAGAAGAG TTAATTGCTG AGCTAAGCGA GAATTTTACT
ATTGCTATCG TTACTCACTC CATGCAGCAA GCCGCGCGTG TTTCACACCG CACAGCTTAT
TTCCATATGG GGCGCTTAGT AGAAGTTAAC GATACAGAAA AAGTATTTAC CAACCCAGAT
CACGAACTAA CCGAAGCGTA TATTACAGGC CGTTTCGGTT AA
 
Protein sequence
MTALDTLERV ETAEIEKPIM QDKQIARGVE KITKTVGVPL TENAKFGIRG VDVFYGEKQA 
VFNVDLDIAK NQVIAMIGPS GCGKSTFLRC LNRMNDTIDI CRVSGSITLD GMDIYDKQLD
VVPLRARVGM VFQKPNPFPK SIYENVAYGP KIHGLASRRS DLDEIVETSL KKAGLWNEVK
DRLHAPGTGL SGGQQQRLCI ARTIAVSPEV ILMDEPCSAL DPIATAKIEE LIAELSENFT
IAIVTHSMQQ AARVSHRTAY FHMGRLVEVN DTEKVFTNPD HELTEAYITG RFG