| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3698 |
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| Symbol | |
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| ID | 3966694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4683654 |
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| End bp | 4684037 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637922795 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_529165 |
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| Protein GI | 90023338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.239756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAATA AAGCTATTAT TCATTCCGAT AAAGCCCCAA AAGCCATTGG TACATACTCA
CAGGCAGTTA AAGTTAGCGA CACCGTATAC CTTTCTGGCC AAATTCCATT AATTCCAGAA
ACAATGGAAA TGATCGAAGG CGATTTCGCT GCGCAAGCCA CTCAAGTATT TAAAAACTTG
CAAGCGGTGT GCGAAGCGGC AAACGGCTCA CTTAAAAATA TAGTTAAGTT AAATATTTAT
TTAACCGACT TGAGCAACTT CCCAATTGTT AACGAAGTGA TGAGCCAGTT TTTTGAACAG
CCTTACCCTG CTCGTGCAGC AATAGGCATT AGCGAGCTAC CCAAGGGTGC GCTTGTTGAA
GCAGACGGTA TAGCGGTTAT TTAA
|
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| Protein sequence | MPNKAIIHSD KAPKAIGTYS QAVKVSDTVY LSGQIPLIPE TMEMIEGDFA AQATQVFKNL
QAVCEAANGS LKNIVKLNIY LTDLSNFPIV NEVMSQFFEQ PYPARAAIGI SELPKGALVE
ADGIAVI
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