| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3697 |
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| Symbol | |
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| ID | 3966693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4681509 |
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| End bp | 4683617 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922794 |
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| Product | GTP diphosphokinase |
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| Protein accession | YP_529164 |
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| Protein GI | 90023337 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.326695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCACCA TTGATTCGCT GAGTCATAGA CTGTCCTCCT ATCTGGAACC CACCCAGATT
AACCGGGTTA AGCGCGCGTA CTACTACGCA GAGCAAGCCC ACACAGGCCA GTATCGCCGC
AGTGGCGAAC CCTATATTAC CCATCCTCTT GCGGTAGCTA ATATTCTTGC GTCTGTGCAT
ATGGATCATC AAAGCTTGAT GGCCGCCATG CTGCACGATG TAATTGAAGA TACCGGTATA
GGCAAACAAG CTATTGCCGA TCAATTTGGC TCCACCGTTG CCGATATAGT CGACGGCGTA
AGTAAACTAG CCAAAATCGA ATACGAAACC CAAGCGGAAA AGCAGGCCAA AAACTTCCAA
AAAATGGCCC TTGCTATGGC GCAGGATTTG CGCGTAATTG TTGTGAAGTT ATCCGACCGA
TTACACAACA TGCGCACCTT AGGTGCCCTC CCCCCCGAAA AAAAGCGCCG CATAGCCAAA
GAAACCTTAG AAATTTATGC CCCCATTGCC CACCGTTTGG GCATGAACGA CTGGCGTATA
GAGTTTGAAG ACCGCGGCTT TGCGGCCATG CACCCGCTGC GCGCGTCTCG CCTACAGGCA
TCCCTTAGCG AAGTGCGCGG TAACCGCAAA GCGTTAGTAG AAAAAATTCA ATCGGGCATA
GAAACAAGAC TACAGCGCGA GAATATCGAC GGCTTGGTTA TTGGCCGCGA AAAGCACCTG
TACAGCATTT ACAACAAAAT GCGCAGCAAA CATAAATCTT TCAAAGAGAT TATGGATGTA
TACGCATTTC GCATAATTGT GGAAGATATA GACACCTGCT ACCGCGCACT CGGTGCTATC
CACAACCTAT ACAAGCCTAA ACCGGGCGAA TTTAAAGATT ACATCGCCAT CCCCAAAGAG
AATGGCTACC AGTCGCTACA CACCATTGTA ATTGGTGTGC GCGGCGTGCC CATCGAAGTG
CAAATTCGCA CCAAAGAGAT GGATGAGCTA TCTAGCCGTG GTGTAGCCGC CCACTGGCTG
TATAAATCTA ACGATGTTAA TTCCGTGCAC TCAGGTAGTT ACGATCGCGC TAACCGCTGG
ATAAAACGCC TGCTAGAAAT TCAAGAGCAC ACCAATAGTT CGGTTGAGTT CGTCGAAAAC
GTTAAAATCG ATTTATTCCG CGATGAAGTG TATGTGTTTA CCCCTAAAGG CGCGATTATA
GAACTACCCG CCGGCGCAAC ACCCGTCGAC TTCGCATTTG GCGTACACAC GCAAGTGGGC
AATACCTGTG TGGCCTGTCG TATTAACGAT CGCCCCGCCC CGCTATCGCA AGTATTAGAA
AGCGGCCAAA AAGTTAAAAT TATTACCTCC GAGAATTCAC AGCCCAACCC TAATTGGCTC
AACTTTGTCG TAACCGCTAA AGCGCGCAGC GCCATTCGCC ACTACCTCAA AAACCAACGC
CATATGGAGT CGGTGGAGCT GGGCAAACGC ATGCTAATGC GCGCGCTGGC AAACTTAGAT
ATAAATTTAG AAGAACTAAA CGAACAGCAA CAAGGCTACT TGTGCGAGCA AACCCAAGTG
GCAAGTATGG AAGAGCTGTA CGAAAGCATT GGCTTTGGCA ATAAAGCCGC CTACAGCGTG
GCAAAAATAT TACAGCCCGA ATCCGACACC AGCAGCGATA CCCTAGCGCC TATTACTATC
GATTCTGCCG ATAGCCTGCT TATTAGCTTT GCGCGCTGTT GCCGCCCCAT ACCGGGCGAC
CCTATCATCG GCCATATGAG TACCGGCAAG GGCATTGTGG TTCACCGCGA TAGCTGTAAA
AACGTCACCG ACCTTGTAAG CAAGAAAGAG AATATTTCTA CTATTAACTG GTCCGCACAG
GTTGCCGGCG AGTTCTTAAC AGAAATTAGG GTGGAAGTTA AATCTGAGCG CGGCATTATT
GCCACACTGG CCACGCGCAT AGCTCAAACC GGCACCAGCA TTGAAGGCAT ACAAGTAGAA
GAACGCGATG CCGAAAGCAG TGTTATTACG CTAGTCATTG CGGTTAATAA CCGCATTCAT
CTCGCCAACG TTATGCGCTC TATTCGCACT ATGCGATCTG TAGCTCGCGT TTCACGCGGC
AAAAATTAA
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| Protein sequence | MLTIDSLSHR LSSYLEPTQI NRVKRAYYYA EQAHTGQYRR SGEPYITHPL AVANILASVH
MDHQSLMAAM LHDVIEDTGI GKQAIADQFG STVADIVDGV SKLAKIEYET QAEKQAKNFQ
KMALAMAQDL RVIVVKLSDR LHNMRTLGAL PPEKKRRIAK ETLEIYAPIA HRLGMNDWRI
EFEDRGFAAM HPLRASRLQA SLSEVRGNRK ALVEKIQSGI ETRLQRENID GLVIGREKHL
YSIYNKMRSK HKSFKEIMDV YAFRIIVEDI DTCYRALGAI HNLYKPKPGE FKDYIAIPKE
NGYQSLHTIV IGVRGVPIEV QIRTKEMDEL SSRGVAAHWL YKSNDVNSVH SGSYDRANRW
IKRLLEIQEH TNSSVEFVEN VKIDLFRDEV YVFTPKGAII ELPAGATPVD FAFGVHTQVG
NTCVACRIND RPAPLSQVLE SGQKVKIITS ENSQPNPNWL NFVVTAKARS AIRHYLKNQR
HMESVELGKR MLMRALANLD INLEELNEQQ QGYLCEQTQV ASMEELYESI GFGNKAAYSV
AKILQPESDT SSDTLAPITI DSADSLLISF ARCCRPIPGD PIIGHMSTGK GIVVHRDSCK
NVTDLVSKKE NISTINWSAQ VAGEFLTEIR VEVKSERGII ATLATRIAQT GTSIEGIQVE
ERDAESSVIT LVIAVNNRIH LANVMRSIRT MRSVARVSRG KN
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