Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3679 |
Symbol | rpmB |
ID | 3966636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4663497 |
End bp | 4663733 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922776 |
Product | 50S ribosomal protein L28 |
Protein accession | YP_529146 |
Protein GI | 90023319 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000000185253 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0401063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGG TTTGTCAGGT TACAGGTAAA CGCCCAGTAA CAGGCCACAA CGTATCTCAC GCAAAAAACC ACACTAAGCG TCGTTTTTTG CCAAACTTAC ACTCTCACCG TTTTTGGGTA GAGTCTGAGA AGCGTTTCGT TAAACTGCGT ATCTCTACTA AAGGTATGCG TATCATCGAC AAGAAAGGTA TCGATACCGT TCTAGCTGAG CTTCGCGCTC GCGGCGAAAA AGTTTAA
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Protein sequence | MAKVCQVTGK RPVTGHNVSH AKNHTKRRFL PNLHSHRFWV ESEKRFVKLR ISTKGMRIID KKGIDTVLAE LRARGEKV
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