| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3674 |
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| Symbol | slmA |
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| ID | 3966631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4656948 |
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| End bp | 4657547 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922771 |
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| Product | nucleoid occlusion protein |
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| Protein accession | YP_529141 |
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| Protein GI | 90023314 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00408157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.151909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACAA ATAATAAGAA GCCTCGGCGC CAACAAATTT TGGAAGCATT AGCGAGTATG
CTTGAGGCTA GCCCTGGTGC GCGTATAACA ACGGCCGCAC TGGCTAAAGA AGTAGGGGTG
TCGGAGGCAG CGCTTTACCG GCACTTCCCA AGCAAATCCA AGATGTTTGA GGGTTTGATT
GAGTTTATTG AAGAAACTAT TTTTACCCGT GTTTCTATTA TAACTGCAGA GCCTATAGAT
GCTTTAGAGC GCTGCCAGAA AATTCTCCAC TTATTGCTTG CCTTCTCTGA GCGCAACCCA
GGTATTACCC GTATTCTTAC TGGTGATGCT TTGGCTGGCG AAACTGAACG TTTGCGTACC
CGCGTAAGTC AATTATTTGA TCGCTTAGAA ACCCAGTTAA AACAAATTTT ACGCGATGCA
GAAATTCGAG ACGGCATGCA CTTTGGTTTA AGTGTGGCAG CCACGGTGAA TTTAATGTTG
GTAAGTGCCG AAGGAAAAAT AGCGCAGTTT GTAAGAAGCG ATTTTAAAAA GTTGCCGACG
GAATCTTGGC AGGAGCAGTG GCCTTATTTG GTGCGCGGCT TCGTAGTAGA AACCGCTTAA
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| Protein sequence | MNTNNKKPRR QQILEALASM LEASPGARIT TAALAKEVGV SEAALYRHFP SKSKMFEGLI
EFIEETIFTR VSIITAEPID ALERCQKILH LLLAFSERNP GITRILTGDA LAGETERLRT
RVSQLFDRLE TQLKQILRDA EIRDGMHFGL SVAATVNLML VSAEGKIAQF VRSDFKKLPT
ESWQEQWPYL VRGFVVETA
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