Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3626 |
Symbol | |
ID | 3966583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4598646 |
End bp | 4599539 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922723 |
Product | heat shock protein HSP33 |
Protein accession | YP_529093 |
Protein GI | 90023266 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.72943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAA ACAACGACCA AATTCAACGC TTTATATTTG ATGCAACCGA TATACGCGGT GAAATAGTTA CCCTAGACCA AAGTTTTTTG GCGGCCACCA ACCACCAACA CCTTTCCCCT TGGTGCAAAA GCTTGTTGGG CGAATTCTTA GCTGCAGTTT CGCTATTAAG TGAAACCCTT AAGTTTGATG GCTTACTTAC CCTGCAAGCG CGCGGCGATG GCGATATTCC CCTTATTATG GCCGAAACCG ATAACCTAGG GCACGTGCGC GGCATAATCA AACCCGCAGC TTCGGCACCT TTAGAAACAC TCGACCTAGG CGATGCCGCG CTGCCAGACA TTATTGGCAA TGGCGTACTG GTAATGACTA TCGACCCCAA AATTGGCGAT CGCTACCAAG GCATTGTACC GTTAGAAAAC GGCACCCTTG CCGAGTGCTT AAGTGATTAT TTTGAGCGGT CTGAACAGCT GGCCACTAAG TTTTTATTAT TTTCATCGCC AGAAAAATGC GCGGGCATGT TGCTACAGGC TTTGCCCGCA CAAAAGGTAA AAGACCAAGC CGAACGCGAA GACAAATGGA ACACCGTTGT ACAATTGGCC AAAACCGTAA AGCAAGAAGA GCTATTCGAA TTGGATCACG CGACTTTGTT GTACCGTTTA TTCAACGAGT TAGAGTGCCG GTTATTTGCG GGTAAGACTA TTCAATTTAA ATGCGGCTGC TCGCGCAAAC GCTGCGCAAA CGCAATAACA TCGCTAGGCA AGCAAGACGC ATTAGAGTTA ATAGAACAAC AGAAAAAAAT AGATATAAAC TGCGAATTTT GCGGTACCAA CTACACCTTT AAACGCAAAG ATATAGACAC CCTATTCGGC GAAGACAACC AACCCCTACA TTAA
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Protein sequence | MQQNNDQIQR FIFDATDIRG EIVTLDQSFL AATNHQHLSP WCKSLLGEFL AAVSLLSETL KFDGLLTLQA RGDGDIPLIM AETDNLGHVR GIIKPAASAP LETLDLGDAA LPDIIGNGVL VMTIDPKIGD RYQGIVPLEN GTLAECLSDY FERSEQLATK FLLFSSPEKC AGMLLQALPA QKVKDQAERE DKWNTVVQLA KTVKQEELFE LDHATLLYRL FNELECRLFA GKTIQFKCGC SRKRCANAIT SLGKQDALEL IEQQKKIDIN CEFCGTNYTF KRKDIDTLFG EDNQPLH
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