Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3611 |
Symbol | |
ID | 3966568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4576851 |
End bp | 4578950 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922708 |
Product | homoserine O-acetyltransferase |
Protein accession | YP_529078 |
Protein GI | 90023251 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000219924 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00028675 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAAAATCT CGTTCAATCG GACGACGCGT TGGTGTGTCT CAAGTTTTGT AACTTTACTG CTTTCCCCTA CTATTTCTTA CGCCGAAGAT GCCGAGCTTA AGCCGGTTGA AAATATTACG GTGATTGGTA ATCGCCAAGC GTATCAGGGG GATTTCACTG TACTCGAAAC GCCGCAAGCA GAATTGGTAA TTAGTGAAGA AGTACTTAAG AGCGCGGGCG TAGTAGATCT TGTTCAAGCG CTGGATTTAT CGGCATCAGT CGCTCGGCAA AATAACTTTG GTGGCCTTTG GAACAGTTTT GCAATTCGCG GATTTGTTGG CGACGAAAAC CTACCCAGTA ATTATTTGGT TAATGGGTTT AATGCGGGGC GAGGCTTTGG TGGCCCGCGT GATTTATCGG GGATTGAGTC GGTAGAGGTA TTGAAAGGTC CACGTGCAGC TTTGTTTGGG CGCGGAGAGC CCGGTGGCAC CATCAATTTA GTAACCAAGC GACCGACTTT TGAGCGTGAT GGCGAAATAG TTTTATCTGC CGGAAGCTTT AACACATACC GTACCGATGT GGATTGGACT TCCCCAGTTT CTGACATGGT CGCAGTTCGT TTAGTCGGTT TTTATGAAGA TGCCGAAAGC TATCGCGATA CGGTTGAAAC CTCCAAATAC GGATTAAATC CGTCGGTAGC GATTTTATTT AGTGATCAAA CAAAATTGAA CTACGAGCTC GAATACACTC AGCAGGAAAT TCCATTCGAT CGCGGCGTGG TGGCGATGAA TAACGAGCTG GGGGTAATAC CTGAAAGCCG CTTTTTAGGC GAGCCGAGCT ATGGCCCAAT TGAAACCGGC GTGCTGGGCC ATCAGTTGGA ATTTCAGCGA AACCTAAATG ATGATTGGAC TGCGCTGGTT GGATTTAATT ATCGCGCAAC CTCGCTTGAA GGCCTCGCTT CCGAAAATGG ATTTGCTGTA CCCGCAGAGG ATGGTACTTT TGCGCGCTTT AGTCGCAGTC GAGATTACGA TGCGGTCTAT CAGGTATTTA GAGCGGAATT AAATGGTAGT TTTAATACCG GCAATATCGT GCACCGTGTA ATTGTTGGTG TTGATGCGGA TACGTTTGAA AATGATCAAT ATTCGCTACG CGACAGATCC ACCGATCAAA GTATCAATAT CTTTAATCCT GTTTATGGTC AGTCACCAGC AGACGAGCTA GAGCTGGCTG ATAATATCGA TCGAGTTGAA ACCCAAGAAT CATCTGGTTT GTTTATTCAG GATCAAATTA GCCTCACCGA TAACCTTGAT GTGCGCGTTG GTGTGCGTAT TGATGATTAT CAACAAAAAC TCGTGAACCG TCTAAACGAC GGTGTTTCGG AATATTCTAA AACGCAGGCC AGCCCACAGT TTGGGGTGGT ATATAAAAGC TCAGAGGTGC TTTCATTTTA CGTGGTGTAT GGCGAAAATT TCCGGCCGCT ATCTGGGGCT ACGGATGAAA ACGGCTTGGA GCCGAATTTA TCTGAATCAA CGGAGCTTGG GCTTAAGTTT GCACTGAACG ATGGCGACTT GCAGGGCAAT ATTGCGATAT TCGATGTTAA GCAATCCAAT ATTGCGACCT TGGATGCAGA CTATAATCCA ACCGCCGTGG GTGAAGCGGG CAGTCAAGGC ATAGAATTCG ACCTAACAGG TAGCCTTACT GACTCCTTAA GTGTATGGGT GTCTTACGCT TACACTGAAA CCGAAACTAA AAACGATTTT ACCGATGCCG TTGGCTGGGC CTCTATACCT GCGGGCTCAG ATTTACTGAA CGTACCTGAT CATCAGCTAA GCACTCAACT GGTTCAGAAA ACAGAGCTTG CCGGTAAGCC GGTTAAATTA ATCGCTGGTG TACTATATGT GGGTGATCGC AGTGGTGAAT TTGGTAATCC TGCATTTAAT TTGCCAAGCT ACACCACTGC TCGCGTTGCT GCACAGTACG AAATTAGCGA GCAGATTGAA TTCAGCTTTG AGATTAATAA TTTATTCGAC AAAAGCTACT ATGCCAATTC CTATGGCCCA ACCTGGGTAA TGCCCGGTGC GCCGCGTAAC TTCCGATTAT CTACCCGTTT CCGTTTTTAA
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Protein sequence | MKISFNRTTR WCVSSFVTLL LSPTISYAED AELKPVENIT VIGNRQAYQG DFTVLETPQA ELVISEEVLK SAGVVDLVQA LDLSASVARQ NNFGGLWNSF AIRGFVGDEN LPSNYLVNGF NAGRGFGGPR DLSGIESVEV LKGPRAALFG RGEPGGTINL VTKRPTFERD GEIVLSAGSF NTYRTDVDWT SPVSDMVAVR LVGFYEDAES YRDTVETSKY GLNPSVAILF SDQTKLNYEL EYTQQEIPFD RGVVAMNNEL GVIPESRFLG EPSYGPIETG VLGHQLEFQR NLNDDWTALV GFNYRATSLE GLASENGFAV PAEDGTFARF SRSRDYDAVY QVFRAELNGS FNTGNIVHRV IVGVDADTFE NDQYSLRDRS TDQSINIFNP VYGQSPADEL ELADNIDRVE TQESSGLFIQ DQISLTDNLD VRVGVRIDDY QQKLVNRLND GVSEYSKTQA SPQFGVVYKS SEVLSFYVVY GENFRPLSGA TDENGLEPNL SESTELGLKF ALNDGDLQGN IAIFDVKQSN IATLDADYNP TAVGEAGSQG IEFDLTGSLT DSLSVWVSYA YTETETKNDF TDAVGWASIP AGSDLLNVPD HQLSTQLVQK TELAGKPVKL IAGVLYVGDR SGEFGNPAFN LPSYTTARVA AQYEISEQIE FSFEINNLFD KSYYANSYGP TWVMPGAPRN FRLSTRFRF
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