| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3603 |
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| Symbol | |
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| ID | 3966465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4563392 |
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| End bp | 4564777 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922700 |
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| Product | TonB-like |
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| Protein accession | YP_529070 |
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| Protein GI | 90023243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.70293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00573623 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACCT TTAACCCAGA TTTCGTATGG GGAGCAGCCA GTTCCGCCTA TCAGGTAGAA
GGCGCCACCA CCACCGATGG CAGAGGCCCC AGTATTTGGG ATGCGTTCAG TTCCATTCCC
GGTAAAACCT ACCACAACCA AAACGCCGAC ATAGCCTGCG ACCACTACAA CCGCTGGCAA
GAAGACGTGG CCATAATGAA AGAGATGGGG CTAAAGGCTT ACCGCTTTTC TATTTCTTGG
TCGCGCATAT TCCCTACTGG GCGCGGCGAA GTTAACGAAA AAGGCGTAGC CTTTTACAAC
AACCTTATCG ACGAATTAAT AAAAAACGAC ATTACCCCTT GGGTAACCCT ATTTCACTGG
GACTTTCCTC TGGCACTGCA AATGGAAATG GACGGCCTAC TTAACCCCGC CATCGCCGAC
GAATTCGCCA ACTACGCCAA GCTGTGTTTC GCGCGCTTTG GCGACCGCGT TACCCACTGG
ATTACCCTAA ACGAACCTTG GTGCAGTGCC ATGCTTGGCC ACGGCATGGG CAGCAAAGCC
CCTGGCCGCG TATCTAAGGA TGAACCCTAT ATAGCCGCCC ACAACTTGCT GCGTGCACAC
GGCAAAATGG TAGATATTTA CCGGCGCGAA TTTCAGCCCA CACAAAAAGG CATGATAGGC
ATAGCCAACA ATTGCGACTG GCGCGAACCC AAAACCGATT CTGAATTAGA TAAAAAAGCA
GCCGAGCGCG CCCTAGAATT TTTTGTAAGC TGGTTTGCCG ACCCCATTTA TTTGGGCGAC
TACCCAGCCA GCATGCGCGA GCGCTTGGGT GAGCGTTTAC CCACCTTTAG CGACGAAGAC
ATTGCGCTAA TAAAAAACTC TAGCGACTTT TTTGGTTTGA ATCACTACAC CACCATGCTT
GCCGAACAAA CCCACGAAGG TGACGTTGTT GAAGATACTA TTCGCGGCAA CGGCGGCATA
TCGGAAGACC AAATGGTCAC CCTCTCCAAA GACCCAAGCT GGGAACAAAC CGACATGGAG
TGGAGCATTG TGCCCTGGGG CTGTAAAAAA TTATTAATCT GGTTAAGCGA GCGCTACAAC
TACCCCGACA TTTACATTAC CGAAAACGGC TGCGCCCTAC CCGACGAAGA CGACGTAAAC
ATAGCCATTA ACGATACACG CCGCGTAGAT TTTTACCGCG GTTATATCGA TGCGTGTCAC
CAAGCAATAG AGGCCGGCGT AAAACTAAAA GGCTATTTTG CATGGACACT TATGGATAAC
TACGAATGGG AAGAAGGCTA CACCAAACGC TTTGGCTTAA ACCATGTAGA TTTCACCACA
GGCAAACGCA CACCTAAACA GTCTGCAATT TGGTATAGCA CGTTAATTAA AGATGGTGGG
TTCTAG
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| Protein sequence | MKTFNPDFVW GAASSAYQVE GATTTDGRGP SIWDAFSSIP GKTYHNQNAD IACDHYNRWQ
EDVAIMKEMG LKAYRFSISW SRIFPTGRGE VNEKGVAFYN NLIDELIKND ITPWVTLFHW
DFPLALQMEM DGLLNPAIAD EFANYAKLCF ARFGDRVTHW ITLNEPWCSA MLGHGMGSKA
PGRVSKDEPY IAAHNLLRAH GKMVDIYRRE FQPTQKGMIG IANNCDWREP KTDSELDKKA
AERALEFFVS WFADPIYLGD YPASMRERLG ERLPTFSDED IALIKNSSDF FGLNHYTTML
AEQTHEGDVV EDTIRGNGGI SEDQMVTLSK DPSWEQTDME WSIVPWGCKK LLIWLSERYN
YPDIYITENG CALPDEDDVN IAINDTRRVD FYRGYIDACH QAIEAGVKLK GYFAWTLMDN
YEWEEGYTKR FGLNHVDFTT GKRTPKQSAI WYSTLIKDGG F
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