| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3592 |
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| Symbol | trmB |
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| ID | 3966454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4552221 |
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| End bp | 4552910 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922689 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_529059 |
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| Protein GI | 90023232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000010395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.13719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCCGG AATTTAAAAA GAAATCCATC CGCAGTTTTG TAATTCGCGG TGGTCGAATG
ACCGAGGGGC AAAAAAATGC CTTCGATAAG TGGTGGCCGC ACTATGGTGT AAGCCTGTTT
GATGGCCCAA TTAACCCTGC CGAGTTGTTT GGACGCAGTG CACCGTTGGT GTTGGAGATT
GGTTTTGGTA TGGGCGACTC GCTGGTGGAT ATGGCCATCG CCGACCCTGA CAGCGATTTT
ATTGGCATCG AGGTTCACCC ACCTGGTGTT GGTCGTCTAA TCAATAGAGC TGGTACCGAA
GGTGTGCCTA ATTTGCGTTG CTATATGGCC GATGCCAACG ACGTGCTCAG CGATTGCATT
CCTGATGGTA GCTTAGACAG GCTGCAATTG TTCTTCCCCG ACCCTTGGCA TAAAAAGAAG
CACAATAAGC GTCGCATAGT GCAGCCAGAG TTTGTAGAAA AAATTCGCGC TAAGCTAAAA
ATTGGTGGCC ACTTTCATAT GGCAACCGAT TGGGAGGCTT ATGCCGAACA TATGATGGAA
GTGATGACAG CTGCACCGGG TTATGAAAAT ATTGCCGGCG GTAGCGAGTT TGCCCCTCAG
CCGAGCTATC GTCCTACAAC CAAATTCGAG CGCAGAGGTG AAAACCTTGG CCACGGAGTA
TGGGATATTA TTTTTAGCCG CAGCTTATAG
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| Protein sequence | MQPEFKKKSI RSFVIRGGRM TEGQKNAFDK WWPHYGVSLF DGPINPAELF GRSAPLVLEI
GFGMGDSLVD MAIADPDSDF IGIEVHPPGV GRLINRAGTE GVPNLRCYMA DANDVLSDCI
PDGSLDRLQL FFPDPWHKKK HNKRRIVQPE FVEKIRAKLK IGGHFHMATD WEAYAEHMME
VMTAAPGYEN IAGGSEFAPQ PSYRPTTKFE RRGENLGHGV WDIIFSRSL
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