Gene Sde_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3590 
Symbol 
ID3966452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4550173 
End bp4550670 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content48% 
IMG OID637922687 
Producthypothetical protein 
Protein accessionYP_529057 
Protein GI90023230 
COG category 
COG ID 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000185848 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.312334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG TTGCCGGTAG TGGCTTATGG CAGAAAAGCC TGTGGGAGAG CGTCTTAGAT 
AGTTACTCTA AGCCCACTGT AGAGCAATTA AGTTTGGCGT GGCAGGATCA ATACGGAGCC
AACGTAACAC TTATGTTGTG GTGTGTTTGG CTGCAGCGAG AAAATATTTG CTTATCGAAA
GATGTATTGC AAGATGTAGT GGCCACTATT AAAGAGGTGG AAGACGCAAC CCTTTGGCCG
TTGCGCCGCG CGCGCGCTGC GCTCTACGAT TTATCGGTAA TTACCCGCGT GCAGCAACAG
CTAGTTAAAA AGCAGGTGCT GGCTGCTGAG TTGTCGATAG AAAAAATATT AGTGCATAAG
TTGCAAGATG TTACTCAAAA ATACATAGAA GTGATGCGCG ATGTAGAGGC GCCATTGCAG
CTTGAAGATT ACTTGCAGTC GCTAGCTATG CCCAATGCAG CGATGTGCGC CCAAGAGTAC
CTAGCGCTCG CAGAATAA
 
Protein sequence
MSEVAGSGLW QKSLWESVLD SYSKPTVEQL SLAWQDQYGA NVTLMLWCVW LQRENICLSK 
DVLQDVVATI KEVEDATLWP LRRARAALYD LSVITRVQQQ LVKKQVLAAE LSIEKILVHK
LQDVTQKYIE VMRDVEAPLQ LEDYLQSLAM PNAAMCAQEY LALAE