Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3553 |
Symbol | |
ID | 3966415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4514685 |
End bp | 4515872 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922650 |
Product | hypothetical protein |
Protein accession | YP_529020 |
Protein GI | 90023193 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.841468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGTAA CTAATTACCG AGCGTTAACT TTGCGTAAAC TACTTGCCGG TATAGCTCTC ACCATTACCA CATGCACACA GGCAGCAGTA TTGCCTGAAG AGCGCACCGA ATTTCTATTT CACCAATTTG ATGGCGGCGG CGTTACCATT AGCGGGCCAT CGGTTTTGGT GCGTAAAAAC GTAAAAGAAA CCGTATCGCT GTGGGGCAAC TATTACGTCG ACTCGGTTAC CAGTGCCTCG GTAGATGTAA TGACGCAAGG CAGCCCCTAT ACCGAAGAGC GCTTGCAAAC CAGCTTAGGC GCAGACTTTC TTTACGACCG CACTACCGTT AGCACTAGCT ACACAGAAAG TAGCGAAAAC GATTACGACG CGCAAACCAT TAGCTTTGGC ATAAGCCAAG ATATGTTTGG CGATTTAACG ACCGTGGCCA TGGGGTTTTC TCACGGCAAC GATATTGTTA TGCGCAATGG TGACGAAGAC GAAGAAGTGC AGTTCGAAGA TGAAGCCACC CACTCGCGCT ATAATTTTGC CGTTACTCAA ATTCTCACTA AAAGCTGGAT AGTATCCCTA GTAGGCGAAA CCGTAATTGA TGAAGGGTTT TTAAATAACC CCTACCGCAG TGTTCGCTAC ACCCAACCCA ATGGCAACAT AGCAAGGCAA CCTGAAAACT ACCCTCGCAC GCGCAATAGC GATGCTTTTG CCATTCGCTC TATGTATTAC ATTCCCTATC GCGCAGCGCT AAAGTTTGAG TACCGCACTT ACAGCGACAG CTGGGGCATT AAAGCAAACA ATTACGAAAT ACGTTACATT CACCCCTATA AAGACAGATG GAAGTTTACC GGTAAGTACC GCGGCTACAG CCAAACCCAA GCTAACTTCT ATTCAGACTT ATTTCCCTAT TCCAACGCGC AGGACTTCCT AGCGAGCGAT AAAGAAATGA GCGCATTCAG CGACTCGCTG ATAGGCGTAG GGGTTGCCTA TGAAGTGAAA TCTAAATACC TGCGTATGTT AGATAAACTT ACTTTAAACC TATATGTAGA CCAGATGAGT TTCGATTATG AGAACTTTCG AAACCATCGC CTGTCTCAAG GTACAGATGA CACACCAGCC GAGTACGCTG CAGGTGAAGA GCCCCTATAC AGCTTTGACG CAACCGTGAT TCGATTCTTT GTATCAATTT GGTACTAG
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Protein sequence | MAVTNYRALT LRKLLAGIAL TITTCTQAAV LPEERTEFLF HQFDGGGVTI SGPSVLVRKN VKETVSLWGN YYVDSVTSAS VDVMTQGSPY TEERLQTSLG ADFLYDRTTV STSYTESSEN DYDAQTISFG ISQDMFGDLT TVAMGFSHGN DIVMRNGDED EEVQFEDEAT HSRYNFAVTQ ILTKSWIVSL VGETVIDEGF LNNPYRSVRY TQPNGNIARQ PENYPRTRNS DAFAIRSMYY IPYRAALKFE YRTYSDSWGI KANNYEIRYI HPYKDRWKFT GKYRGYSQTQ ANFYSDLFPY SNAQDFLASD KEMSAFSDSL IGVGVAYEVK SKYLRMLDKL TLNLYVDQMS FDYENFRNHR LSQGTDDTPA EYAAGEEPLY SFDATVIRFF VSIWY
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