Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3537 |
Symbol | |
ID | 3966379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4493145 |
End bp | 4494386 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922634 |
Product | putative acetyltransferase |
Protein accession | YP_529004 |
Protein GI | 90023177 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCG GTAAGCAAGA CAATTGGTTA AGCCTTAGGG AAGATATTCC CGCCTGCACG AATAGTGTTT ATTTAAATAG CGCTGGCGCT TCTCCCACCC ATAGCGCTAC GCACCATGTT ATGGTGGCGC ACTTGCAACT CGAGCGAGAG CTGGGCGGCT ATCAAGCGGC CATAAAAGCC ATGCCTGCTA TAGAAGCTTT TTACACTAAC ATTGGCACAC TTATAAATGC GCAGCCCCAC GAAATAAGCT ACTGCGAAAA CGCAACGCGC GCTTGGCAAA TGGCATTTTA TGCATTGAAC TTAACCAAAG GCGATAGAGT AATTACTCAT ATTTCGGAAT ACAGTTCGAA TTTAATAGCC ATGCAGCATC GCGCCGAGCG CGACGGTATT ATTATTGATA TGGCACCAAG CCTTACAGAT GGCACTATCG ATACCGCCAA CCTTGAACAA CTTATCACCC CCCGCACCAA AGTGATTGCC ATCACCCATA TTGCCATGCA CTTAGGAATG GTTAACCCAG TAAACAACAT TGGCGAAATA GCGAATCGAC ACAACTTAAT TTTTATGCTC GACGCCTGCC AATCTTTAGG CCAGCGGGTA ATTAACGTAG AAAATATTGG CTGCCACATT CTTACTGCAA CGGGTAGAAA ATTTTTACGC GGCCCCAGAG GCACAGGGTT GCTGTATGTA AATGCCAGCA TACTACCTAC ATTACAGCCC GCTTTTATCG ACAACCTTTC TGCTACTTGG CAAGCAGACG GCAGCTTTTG CCTAAGCCAA ACCAATACGC GTTTTGAAAG CTGGGAACGC AATATTAGTG GTATGTTAGG GCTCGCCAAG GCGGTAGAAA TACTTAATCA AATTGGCCCA CACGGTGCGC AAGCGCGTGT AAGTGAGCTT GCTAGCTACG CGGTTACTTC ACTCACCGGC AGCCGTTTCA CCACCTTCGA ATCGACTTGC GAATCGACAG ACAAAACCCC GCGCGAAACA GCCAGCGACA AACTCTCTGG CATTATTACC CTTAAGCTAG AACACACGGT CAACCCATTC GATATTGCAC AACAGCTTGA GCAACAAGGC GTGCACCTAT CGGTAATTAA ACGCCAGCAG GCTTTCCCTT ACTTTCGTTT TAGGCATGTC GAGCAGGAGG GGATTATTAG AATAGGGTTG CATTACTTTA ATACACATGC GGATATCGAC TTTTTAAACA CTCAACTACA AGCAATTGCG CCCAACACTT AA
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Protein sequence | MHSGKQDNWL SLREDIPACT NSVYLNSAGA SPTHSATHHV MVAHLQLERE LGGYQAAIKA MPAIEAFYTN IGTLINAQPH EISYCENATR AWQMAFYALN LTKGDRVITH ISEYSSNLIA MQHRAERDGI IIDMAPSLTD GTIDTANLEQ LITPRTKVIA ITHIAMHLGM VNPVNNIGEI ANRHNLIFML DACQSLGQRV INVENIGCHI LTATGRKFLR GPRGTGLLYV NASILPTLQP AFIDNLSATW QADGSFCLSQ TNTRFESWER NISGMLGLAK AVEILNQIGP HGAQARVSEL ASYAVTSLTG SRFTTFESTC ESTDKTPRET ASDKLSGIIT LKLEHTVNPF DIAQQLEQQG VHLSVIKRQQ AFPYFRFRHV EQEGIIRIGL HYFNTHADID FLNTQLQAIA PNT
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