Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3514 |
Symbol | |
ID | 3966356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4469805 |
End bp | 4470398 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637922611 |
Product | hypothetical protein |
Protein accession | YP_528981 |
Protein GI | 90023154 |
COG category | [S] Function unknown |
COG ID | [COG3079] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00932304 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACC TTTTTGATTT CGCGTTTTTA AACGACCAAA TGTTGTCCAT GGGCGCGGTT AACTCCGTGT CCGAATTGCA GGGTTTGCTG TGTGGCTATT TGAGCGGCAA GCAGGCCAAG GTAGGCCCAG AGGCGGTGCT CGACACGGCC GCATGGCGAA TGTTGGCGGT GGAGTACATG GAGCTGGCCG ATTTTGATTT AGAAGAAGAT CGCCTCGCAT TATTTGATTT ACTATTAGAA AAAACACGCA ACGCCTTGGT GGATACGCAG CTTGGTTTTC AACCCTTATT GCCAAGTGAT GATGTCGGCA TAGTGCGCAG GGCCGAGGAA CTAGGCGCGT GGTGCACCGG CTTTTTACAC GGTTTGGGCC GCTCGGGGTT AGAGGGCAGC GATGCCTTTA GTACCGATGC CGCCGATGCC ATTAAAGATT TAGCCCACAT AGCGCAAATA AGTGCCGAAG TGGACGAGCT GGAAGAAAAC GAAGTGTATT GGTTTGAATT GGTGGAATAC GTAAAAGTAG CCGTGTTATG CGTTTACTCC GAACTTGCCG CCAAAGCGCC AAAACCTGCG GGAGACGCAG GCCTAGTGCA TTGA
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Protein sequence | MSNLFDFAFL NDQMLSMGAV NSVSELQGLL CGYLSGKQAK VGPEAVLDTA AWRMLAVEYM ELADFDLEED RLALFDLLLE KTRNALVDTQ LGFQPLLPSD DVGIVRRAEE LGAWCTGFLH GLGRSGLEGS DAFSTDAADA IKDLAHIAQI SAEVDELEEN EVYWFELVEY VKVAVLCVYS ELAAKAPKPA GDAGLVH
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