Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3456 |
Symbol | |
ID | 3966279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4396972 |
End bp | 4398084 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637922553 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II |
Protein accession | YP_528923 |
Protein GI | 90023096 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0031951 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAACTGA ATACCACAGA AGAAATTATT GATGAAATCC GTCAGGGCCG CATGGTTATC TTGATGGACG ACGAAGATCG CGAAAACGAA GGCGATCTTA TTATGGCTGC CGAGCAAGTG CGCCCCGAAG ACATTAACTT TATGGCGACC CACGCCCGCG GGTTAATTTG TTTGACCCTG TCGGAAGAGC GCTGCAAGCA ACTCGATTTG CCTCTTATGG TACGCGACAA TCACGCCGCG CATTCCACTA ACTTTACCGT ATCTATCGAG GCGGCCGAGG GCGTAACAAC GGGAATTTCC GCCGCCGACC GCGCGCGCAC CATTCGCGCT GCGGTTAAAC GCGATGCTTT GCCACGCGAT TTAGTTCAGC CGGGGCATAT CTTCCCGTTA ATGTCTCAAC CTGGCGGTGT ACTAAGCCGA GCTGGCCACA CAGAGGCAGG CTGCGACTTG GCGCGTTTGG GTGGCTACGA GCCAGCTGCC GTTATAGTGG AGATTATGAA CGAAGATGGC AGCATGGCGC GCCGCGAAGA TTTAGAAAAA TTCGCAAAGC TGCACAATAT TAAAATTGGC ACCATCGCCG ATTTAATTCA GTACCGTGCC ATTAACGAAA AAACCGTTAC CTGTATTAAC GAGCGCACCG TACACACCAA TCACGGCGAA TTTATTTTAA AAACCTATTT AGATAAAGCG CGCAAAGAGT GCCATTTTGC CTTACTGAAA GGCGAGGTTC GCCCCGACGA ACCCACGCTT GTGCGTGTGC ATGTGGGCAA CACCGCGCGC GACGTATTAG GTGTGCAGCG CACCGACATG GATAACCTTT CGTGGAGCTT CCAAGATGCC ATGAAACGCG TGGCAGAAGA GGGCAACGGC GTGCTGGTAT TAATTTGCCA CAACGAAACC ACCGAAGAAA TTGAAGAAAG TATCGATTGG ATGCTAAGCG GTAAAAAAGC GCGCCCTCGC CAAGACGTAG CCTACAAACA AGTGGGTACC GGTTCGCAAA TACTTAAAGA TTTAGGCGTA AGTAAAATGC GTTTGCTAAG CGCACCTTTC AAATTCAAAG CTATTTCTGG TTTTAATTTA GAAGTTGTGG AATACCTTAA AAACGACGCA TAA
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Protein sequence | MELNTTEEII DEIRQGRMVI LMDDEDRENE GDLIMAAEQV RPEDINFMAT HARGLICLTL SEERCKQLDL PLMVRDNHAA HSTNFTVSIE AAEGVTTGIS AADRARTIRA AVKRDALPRD LVQPGHIFPL MSQPGGVLSR AGHTEAGCDL ARLGGYEPAA VIVEIMNEDG SMARREDLEK FAKLHNIKIG TIADLIQYRA INEKTVTCIN ERTVHTNHGE FILKTYLDKA RKECHFALLK GEVRPDEPTL VRVHVGNTAR DVLGVQRTDM DNLSWSFQDA MKRVAEEGNG VLVLICHNET TEEIEESIDW MLSGKKARPR QDVAYKQVGT GSQILKDLGV SKMRLLSAPF KFKAISGFNL EVVEYLKNDA
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