| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3454 |
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| Symbol | nusB |
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| ID | 3966277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4395974 |
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| End bp | 4396426 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922551 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_528921 |
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| Protein GI | 90023094 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00262306 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA GCGCAGCAGC TCGCGGTCGA GCCCGACATT TTGCCATGCA AGCCCTCTAC
CAGTGGGAAA TGTCTGGCAA TGCACTTCAT GTGATTGAAG CCGAATTCCA CACCGACAAC
GATATGTCGA AAGTGGATGT GGAATATTTT CACGAAATTC TTCACGGCGT AGCGGCTATT
AAATCAACTC TGGATGAAAC CTTTAAACCG TTTTTAACCG GTTTGCGTTT AGATGAAATC
GACCCAGTGA GTTTGGCGGT ATTGCGTCAA GCTTGTTACG AATTCGAAAA GCGTGTTGAT
GTGCCCTACA AAGTAGTCAT AAACGAAGCG GTAAATCTTG CCAAAAAATT TGGCGCAGCC
GATAGCCACA AGTTTATTAA CGGCGTGTTA GATAAAGTAG CATTGCGCGT TCGCAAAGAC
GAAGTAGAAG CCATGCGTAC CGGCCGAAGC TAA
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| Protein sequence | MKVSAAARGR ARHFAMQALY QWEMSGNALH VIEAEFHTDN DMSKVDVEYF HEILHGVAAI
KSTLDETFKP FLTGLRLDEI DPVSLAVLRQ ACYEFEKRVD VPYKVVINEA VNLAKKFGAA
DSHKFINGVL DKVALRVRKD EVEAMRTGRS
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