| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3376 |
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| Symbol | |
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| ID | 3965925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4305690 |
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| End bp | 4307021 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637922473 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_528843 |
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| Protein GI | 90023016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000590256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.326432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA AGCTGTTCAA GCTGTTCGAG CCCTCCGCCG CCGCGAGCCA AACGATTGCA
GAGCAAGATC ACGGTATCGA TTCGCACGAC ATAAGCCATG CTTCATATAA AACTATCGAG
CAATTGCAAC GCGCAGGCTA CGAGGCCTAC CTTGTGGGTG GCGGCGTTCG CGACTTACTG
CTCGATGCCG ACCCCAAAGA TTTCGACGTA GCCACCAGCG CTACCCCCGA ACAAGTTAGA
AAGGTATTTC GCAACGCCCG CATAATTGGC AAGCGCTTTC GCATAGTTCA CGTACGCTTT
GGCCGCGAAA TCATTGAGGT AACTACCTTT CGCGGGTCCC ATACCGATGC GCGCTCTAGC
CGCGACGCCA GCCAGTCCGA TACTGGCGTC TTACTACGCG ACAATGTTTA TGGCGATATC
AAATCCGACG CTATGCGCCG CGATTTCACC ATTAACGCCC TGTATTACAA CCCAATTAAC
GGCGAAGTAC TCGACTTTTG CGGCGGCCTA AAAGACCTTA AAAACCGTAC AATTCGCATT
ATTGGCGACC CAGAAGAACG CTACAAAGAA GACCCCGTGC GTTTACTGCG CGCCGCGCGC
TTTGCCGGCA AGCTGGGCTT CAACATAGAC CCGGTAACCG AAAAACCCAT TCGCGAGCAC
GCCGACTACC TAGCCCACAT ACCTTCTGCA CGCTTGTTCG AAGAAGTGCT TAAGCTGTTT
ATGTCTGGCC AAGCCACCGC TACGCTAAAC AAACTGCGTG ACTACGACCT GTTTAAATAC
CTATTTCCTG CAACCAACCA CTGTTTAGAT CACGGTACAG ATTTCGATCG CAGACTAGTC
GAGCAAGCAA CAATCAATAC CGATAAACGC ATTCGTCAGG GCAAGCGTAT TACACCTGCG
TTTATTTACG CCGCGTTTTT GTGGTCGCCA CTGCAAGCCA GCATGCGCCC ACTTATTCAA
GACCAAAAAA TGTCGCCGCA AGAAGCCATG CTCCAGGCCA GCCAAGGCAT TATTAGCCAG
CAGTTGGCTT GCACGGCTAT TCCTAAACGC TTTCTAATTC CAATGCGTGA CATTTGGCAG
CTGCAATTAC GCTTGCCCCG CAGAGATCGC GGCAAAGCCT ACGCCACCCT CGAGCACCAG
CGTTTTCGTG CAGGTTACGA CTTTTTATTA TTGCGTGAGG AAGCTGGCGA GAATGTTGAA
GGCCTAGGGG ATTGGTGGAC AAAATTCCAA TTCGCACCGG AAGAAGAGCG CGAGGCGATG
ATTGCGCAAA TTGCACCGCC GCGCCGCCGC AACCCGCGCA AACGACGCAG CAAAAAACCC
GCGCAAAGCT AA
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| Protein sequence | MLKKLFKLFE PSAAASQTIA EQDHGIDSHD ISHASYKTIE QLQRAGYEAY LVGGGVRDLL
LDADPKDFDV ATSATPEQVR KVFRNARIIG KRFRIVHVRF GREIIEVTTF RGSHTDARSS
RDASQSDTGV LLRDNVYGDI KSDAMRRDFT INALYYNPIN GEVLDFCGGL KDLKNRTIRI
IGDPEERYKE DPVRLLRAAR FAGKLGFNID PVTEKPIREH ADYLAHIPSA RLFEEVLKLF
MSGQATATLN KLRDYDLFKY LFPATNHCLD HGTDFDRRLV EQATINTDKR IRQGKRITPA
FIYAAFLWSP LQASMRPLIQ DQKMSPQEAM LQASQGIISQ QLACTAIPKR FLIPMRDIWQ
LQLRLPRRDR GKAYATLEHQ RFRAGYDFLL LREEAGENVE GLGDWWTKFQ FAPEEEREAM
IAQIAPPRRR NPRKRRSKKP AQS
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