| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3373 |
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| Symbol | |
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| ID | 3965922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4299318 |
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| End bp | 4300214 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637922470 |
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| Product | glutamate--tRNA ligase |
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| Protein accession | YP_528840 |
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| Protein GI | 90023013 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0303473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATC AAGCCCCCTA CATTGGCCGC TTCGCCCCTT CGCCCTCTGG CCCTTTGCAT
ATGGGGTCTT TAGTGTGCGC ACTGGCAAGC TATTTAGACG CCCGCAGCCA CAATGGCACT
TGGCTTGTAC GCATGGAAGA TATAGACCCG CCTCGAGAGC AAGCGGGGGC CGCCGACCTA
ATATTATCTT GCTTACAAAA ACACGGGCTG CAGTGGGACG ACAGCGACGT GATGTTTCAA
AGCACACGCG CTCAAGCCTA CAATCAAACA CTTAGCAGCC TGCGAGAAAG CGCGCTTATC
TACCCCTGTA GATGCACCCG CAAGCGACTC AATACGCTCA ACGGCCGCTA CGACGGTTAC
TGCAAAGCCC ACCCTGCAAC CTCCCCTGCC GCACTTCGGC TTGATCTTGA GGGCGCAAAA
GCCAAGGGAG TGCCACTGCA ACAAGCTTTT TGTGACGGCT TACAAGGCGA GCAATATGAA
GATTTAGCGC AGCAAGGCGA CTTTGTAATC CACCGCAAAG ATGGCCTGTT TGCCTATCAA
TTAGCGGTAG TTGTAGACGA TATAGCGCAA AATATTACCC ATGTTGTACG CGGTAGCGAC
TTGCTCGACA CCACCGCGCG CCAACGAGCA TTAATGCAGC TGCTGGGCCA CCAACCTCCG
CAATATAGCC ACATCCCCGT TCTAGTGGAT GCCAACGGCA ATAAGCTAAG CAAACAAAAT
CACGCCCCGG CAGTGGAATT CGACACCCCC ACGCACAATC TTATCGATGC GCTAACGCTT
TTAGGGTTCC ACACCGCAGC GCTTACTCCC GCTACCTCCA CATCATCAAT TCTACATTGG
GCCATACCTA GGTGGGCAAA TGTGGCCACC ACCCTACAGG GCCGCCTAAG CCTTTAA
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| Protein sequence | MTNQAPYIGR FAPSPSGPLH MGSLVCALAS YLDARSHNGT WLVRMEDIDP PREQAGAADL
ILSCLQKHGL QWDDSDVMFQ STRAQAYNQT LSSLRESALI YPCRCTRKRL NTLNGRYDGY
CKAHPATSPA ALRLDLEGAK AKGVPLQQAF CDGLQGEQYE DLAQQGDFVI HRKDGLFAYQ
LAVVVDDIAQ NITHVVRGSD LLDTTARQRA LMQLLGHQPP QYSHIPVLVD ANGNKLSKQN
HAPAVEFDTP THNLIDALTL LGFHTAALTP ATSTSSILHW AIPRWANVAT TLQGRLSL
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