| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3337 |
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| Symbol | |
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| ID | 3965886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4264763 |
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| End bp | 4265944 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922434 |
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| Product | penicillin-binding protein 6 |
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| Protein accession | YP_528804 |
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| Protein GI | 90022977 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000146078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0197837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCT CAATGCGCTC CTTCGTTGTT TGCTTACTCG CCACGATTTG TGTACCTGTA
TTCGCAGCTC AAGTTATTGT GCCTGCGCCC CCAGAGCTTT CTGCTAAAGC GTATTTATTG
ATAGACGCCG ATACCGGCAA GGTAATTGTA GAGAGCAATG CCGATGAGGT AATGGAGCCT
GCAAGCCTTA CCAAAATGAT GACCAGCTAT ATCGTTTCGG AAGAAATAGA AAGCGGCCGC
TTAACAGAAG ATGCGTTAGT GCTAGTGAGT GATGACGCAT GGCGTCGCGG TGGTTCGGCA
AGCGGTAGCT CGACTATGTT CCTCGACCCT CGCAGCGAAG TACGCGTTAT TGACTTGTTG
CGCGGTGTAA TCATTCAATC TGGTAACGAT GCCAGTATCG CGCTAGCGCA ACACATCGCT
GGCGACGAAT CTGCCTTTGC CGATGTAATG AACCAGCAGG CGCAGTTATT AGGCATGAAC
AGCACCAACT TTGAAAATGC CACAGGCTGG CCAGCCGAAG GGCACGTAAC TACTGCCCGC
GACCTCGCTA TACTTGCGCG TGCGCTCGTT AACGACCACC CAGAGCACTA CGCGCTTTAC
TCCGAAAAAT ACTTTAAATA CAACGGCATA AACCAGCCTA ACCGCAACCG CTTACTGTTT
CGCGACGACA GCGTAGACGG CATGAAGACT GGCCACACCG AATCTGCCGG TTATTGTTTG
GTGGCTTCTG CTAAGCAAGA TGATATGCGT TTAATCTCGG TGGTTCTGGG CACTAAATCC
GACTCGGCCC GCACCCAGGA TTCGCAAAAG CTTTTATCCT ACGGTTTCCG TTATTACAAA
ACCTACACCT TGTACAACGA AGGTGAGGCT ATTAGCGATG CAAGAGTTTG GAAGGGCTTA
ACCGACAAAG TTAGCTTAAC GGTAAATAGC GATATCGAAG TGACCATTCC TCGCGGCGCA
CATAAATCGG TTAAAGCTGT TACCCGTGTA GATTCTATTA TTGAAGCGCC TGTGGCCCCC
GGCCAAATTT TAGGTAGCCT ACTGCTTAAA CTCGAAGACG AAGTGCTAGC AGAATACGAC
CTAGTGGCTG CCACCAAAGT GGATGAAGCC GGCTTTTTTG CTCGCACCTG GGACAGCATC
ATGTTGATGT TTGAAGATGA TGAAGAGGCA GCAAGTGAGT AA
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| Protein sequence | MLTSMRSFVV CLLATICVPV FAAQVIVPAP PELSAKAYLL IDADTGKVIV ESNADEVMEP
ASLTKMMTSY IVSEEIESGR LTEDALVLVS DDAWRRGGSA SGSSTMFLDP RSEVRVIDLL
RGVIIQSGND ASIALAQHIA GDESAFADVM NQQAQLLGMN STNFENATGW PAEGHVTTAR
DLAILARALV NDHPEHYALY SEKYFKYNGI NQPNRNRLLF RDDSVDGMKT GHTESAGYCL
VASAKQDDMR LISVVLGTKS DSARTQDSQK LLSYGFRYYK TYTLYNEGEA ISDARVWKGL
TDKVSLTVNS DIEVTIPRGA HKSVKAVTRV DSIIEAPVAP GQILGSLLLK LEDEVLAEYD
LVAATKVDEA GFFARTWDSI MLMFEDDEEA ASE
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