| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3334 |
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| Symbol | |
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| ID | 3965883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4262687 |
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| End bp | 4263754 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922431 |
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| Product | lipoyl synthase |
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| Protein accession | YP_528801 |
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| Protein GI | 90022974 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.117478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00889782 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAT CCTCAGAGAA CAACACTGGC GTACAAAGCC ATGAACCCAA CGCGGCCACA
AGCCAAGAAA GCGTAATGAT GTCCGATGCA ATAGCAACCG ACGGCGTGCC TGTTAAACGC
ACCCGCCGCA TTAAACAGGG CGAAAAACTG CGCGATGCCG ATAAGGTAGA GCGTATCCCC
GTAAAAGTAA TTGCAACGGA TAGCATGCTG CGCAAACCCG ATTGGATTCG CATTCGCGTA
AAAGCCGACC CCGAAGTGGA TCGTATTAAA AAACTACTGC GCAAAAACAA ACTGTCTACG
GTTTGTGAAG AAGCCAACTG CCCTAACCTA AGCGAATGCT TTGGCGGCGG TACTGCTACC
TTTATGATCA TGGGCGATAT CTGTACTCGT CGCTGCCCTT TTTGCGACGT GGGCCACGGC
AAGCCCAACC CGTTAGACGA GAATGAGCCA AAACACTTGG CCGAAGCTAT CGCCGATATG
GGCCTCAAAT ACGTGGTGGT TACCTCGGTG GACCGCGACG ACTTGCGCGA TGGCGGTGCT
CAGCATTTTG CCGACTGTAT CCGTGAATCC CGTGCGCTTT CGCCCAACCT GCAGGTAGAA
ATTCTCACCC CAGATTTTCG TGGCCGCATG GATATAGCGT TAGATATTCT CGCCAACGAG
CCGCCCGATG TATTTAACCA CAACCTAGAA ACCGTGCCGC GTTTGTACCG CGAGGCGCGC
CCAGGTGCCA ATTACAAATG GTCGCTCGAG CTGCTTAAAA AGTACAAAGC GCTTAGGCCA
GAAGTGCTTA CTAAATCTGG CTTGATGGTA GGTTTAGGGG AAACCAAAGA AGAAATCTTT
GAAACCCTGA AAGATATGCG CGAACACGAT ATAGACATGT TAACCATCGG TCAGTACCTA
CAGCCGTCGC GCGATCACTT GCCGGTTAAA CGCTATGTAG AGCCTGCAGA GTTTGACGAG
TACACCGCAA TGGCAGAGCA GCTAGGCTTT AAGCACGCCG CTTGTGGCCC GCTTGTGCGC
TCGTCCTACC ATGCCGATAA ACAAGCTCAC GGTGAAGAAG TTAAGTAA
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| Protein sequence | MSESSENNTG VQSHEPNAAT SQESVMMSDA IATDGVPVKR TRRIKQGEKL RDADKVERIP
VKVIATDSML RKPDWIRIRV KADPEVDRIK KLLRKNKLST VCEEANCPNL SECFGGGTAT
FMIMGDICTR RCPFCDVGHG KPNPLDENEP KHLAEAIADM GLKYVVVTSV DRDDLRDGGA
QHFADCIRES RALSPNLQVE ILTPDFRGRM DIALDILANE PPDVFNHNLE TVPRLYREAR
PGANYKWSLE LLKKYKALRP EVLTKSGLMV GLGETKEEIF ETLKDMREHD IDMLTIGQYL
QPSRDHLPVK RYVEPAEFDE YTAMAEQLGF KHAACGPLVR SSYHADKQAH GEEVK
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