Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3324 |
Symbol | |
ID | 3965873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4252754 |
End bp | 4253983 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922421 |
Product | hypothetical protein |
Protein accession | YP_528791 |
Protein GI | 90022964 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03032] conserved hypothetical protein TIGR03032 |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00237528 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGAAT CACCCGATGA GCAAACAAAC ACTTTTGATT TTACTTGTGA ATATTCCAGT AACTTACCCG AGTTGCTTAG CGCACTAAAT ATATCCATTG CGTTTACTTC GTACCAAGCT GGTCGCTTGA TGGTGGTAAG AAGCGACGAA AAAAGTATTG ATGTGAATTA TAAAAATTTT CCCCGCCCAA TGGGGTTATG CAGCACCGAA AGTGGGTTAA CTCTGGGTAC CTTTGCCCAA ATTATCAATT TCCATCGAGC CGATAATCTT ATCGATCAAT TAAAGGCCCC TCTGCCTTCT ATTCAAGATG ATATTACAGC CCCGCGTATT CACCCTAAAG AGCAGGAAGG GGGCGATAGT GCAGGTGCGC TCGAGGTAAT GAGCGAGTTA GATAGTGAAC AAGAAGAACG GCACTCAGAA CAGCTTAGAC TGCAGCAAGA GCGACAGAAA AAATTACACG AAGGCGTCGA CCCGCGTGTA GACAGTTGTT TTATTACGCG CTCCAGCCAC TACACCGGCA TGATCAATCT ACATGATATT GATTGGGGGG ATGAAGGGCT ATGGGTTGTT AACTCCAGCT TCTCGTGCCT GTGCACGCTA GACCCAGATT ACAGCTTTGT ACCGCGCTGG AAGCCACATT TTATTACCGC CCTAGTGCCA GAAGACCGCT GCCACTTAAA TGGCATGACC TTAAAAGACG GAAAGCCCGC CTACGTAACC ACGTTTTCTA CCTTCGATGA GCCGGGGTTG TGGCGAAAGG GCGATAAATT TAATGGCACG CTAATGAGCG TAGATGGCAA CGAAATACTC ATTCGCAATT TAGTTATGCC ACATTCGCCG CGCTTTTATC AAGATAGCGT CTATTATTGT AATTCGGGCC TTGGGCTTTT TTGTAAATAT AACCCTCGTA CGGGTGATGA AGAGATAATT GCCGAGCTAC AGGGTTTCAC TCGCGGTGTC GACTTTTATG GCTCACTTGC GTTTGTTGGG TTATCTAAGG TACGTGCGGG CAACGTATTA CATGCGCCGC CCCTAGCTAC AAAATACGAT GAAACATTTT CTGGGATATG GCTCATCGAT TTAAGCACCA ATAGCACTAT TGGTTATATT AAATTTACCG GCAACGTCGA CCAAATTTAC GATATTGCCG TTATACCTAA TTGTAAGTTC CCAGAGATTT TGGAGCCGTC GCATCCGCGA ATGCGCAACC ATTTTTGTAT TCCACTATAA
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Protein sequence | MIESPDEQTN TFDFTCEYSS NLPELLSALN ISIAFTSYQA GRLMVVRSDE KSIDVNYKNF PRPMGLCSTE SGLTLGTFAQ IINFHRADNL IDQLKAPLPS IQDDITAPRI HPKEQEGGDS AGALEVMSEL DSEQEERHSE QLRLQQERQK KLHEGVDPRV DSCFITRSSH YTGMINLHDI DWGDEGLWVV NSSFSCLCTL DPDYSFVPRW KPHFITALVP EDRCHLNGMT LKDGKPAYVT TFSTFDEPGL WRKGDKFNGT LMSVDGNEIL IRNLVMPHSP RFYQDSVYYC NSGLGLFCKY NPRTGDEEII AELQGFTRGV DFYGSLAFVG LSKVRAGNVL HAPPLATKYD ETFSGIWLID LSTNSTIGYI KFTGNVDQIY DIAVIPNCKF PEILEPSHPR MRNHFCIPL
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