Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3282 |
Symbol | |
ID | 3965774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4191571 |
End bp | 4192845 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922379 |
Product | putative hexuronate transporter |
Protein accession | YP_528749 |
Protein GI | 90022922 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0854544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.252683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA AAGGTTTGAG ATGGATGATC TTGACGATGG TGGCAATCGC TACCATCGTA AACTACATAG ATCGAAATGC GTTGGCCGTT ATGTGGCCGG GTATTTCTGA AGACTTAGGG CTGGATAACA ATGATTACGC CAATATTATT ATGTTGTTCA TGGTTTCCTA TGCGCTAGGT CAAGCATTGT TCGGCAAAAT ATTCGATATG CTCGGCACGC GCGCTGGCTT TATTTTAGCC ATCGTGGTGT GGTCGGTATC GGTAGCGTTG CACGCTTTCG CGCGTGGCGT AGTCTCGCTC GGTATCTTCC GGTTTATTAT GGGTTTCGGT GAAGCAGGTA ACTGGCCTGG TGCTACCAAG TCGAATGCCG AATGGTTCCC GATTAAAGAG CGCGCATTAG CGCAGGGTAT CTTTAACTCA GGTGCTGCGT TGGGTGCGGT AATTTCTGCT CCATTAATTG CTTATTTGTA CCTATTAATG GGATGGCAGG CTACGTTCAT TGTTATTGCG AGTTTTGGTT TTATTTGGGT TGTGCCTTGG TACATCTTAT ACAAAGCAGC CCCAGATTCT CACCCATGGT TAAGTGACGA AGAGCGTGAA TATATTCTTA AAGGGCAAAA AGCGCCTAGC CAAGATGAAT CTACTGGTGA TGACGTTGCC GCGCCAACTT GGATGGAAAT GTTGCAGTAT CGTCAAACCT GGGGCGTTGT ACTTTCTCGC TTCTGTTTAG ATCCAGTTTG GTGGTTGTTC TTATCTTGGT TGCCAATTTA TCTTGCCGAT CAGTTTGGCT TTAATGTTAA AGAAATCGGT ATGTTCGCTT GGATACCCTA TGTGGGTGCA GCGGCGGGCA GCTTGTTTGG TGGCTGGTTA TCTGGTCGTC TAATTAGCAG TGGTAAATCG GTGAATTTTG CACGCCGCTT CGCTATTACA TTAGGTGGCG TAATCATGTT CCCTTGTTTG TTGTTAACCG CATACGCGGG CGACCCCCTT GTTGCCGTAC TACTGATTGC TTGTATTTTG TTTGGCTTCC AGTGTGCGAT CGGCAATATC CAAACCTTGC CTAGTGACTA CTTCGACGGT AAGAGCGTTG GTTCACTAGC AGGCTTAAGT GGTGCGGCTG CAGTTGTAGG TGTAATTATC ACAACCAAGC TAGTACCTAT GATAGCCACT GTAAGCTACG CGCCAGTGTT TATGTTTGCA GCGTTGTTAG TACCATTATC CGTGCTGTCA GTGTGGTTGA TTTCTGGCCC AGTAAAGCCA GCAGGAAAAC TTTAG
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Protein sequence | MKIKGLRWMI LTMVAIATIV NYIDRNALAV MWPGISEDLG LDNNDYANII MLFMVSYALG QALFGKIFDM LGTRAGFILA IVVWSVSVAL HAFARGVVSL GIFRFIMGFG EAGNWPGATK SNAEWFPIKE RALAQGIFNS GAALGAVISA PLIAYLYLLM GWQATFIVIA SFGFIWVVPW YILYKAAPDS HPWLSDEERE YILKGQKAPS QDESTGDDVA APTWMEMLQY RQTWGVVLSR FCLDPVWWLF LSWLPIYLAD QFGFNVKEIG MFAWIPYVGA AAGSLFGGWL SGRLISSGKS VNFARRFAIT LGGVIMFPCL LLTAYAGDPL VAVLLIACIL FGFQCAIGNI QTLPSDYFDG KSVGSLAGLS GAAAVVGVII TTKLVPMIAT VSYAPVFMFA ALLVPLSVLS VWLISGPVKP AGKL
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