| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3197 |
|---|
| Symbol | |
|---|
| ID | 3965650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 4074208 |
|---|
| End bp | 4075014 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637922294 |
|---|
| Product | putative sulfate uptake protein |
|---|
| Protein accession | YP_528666 |
|---|
| Protein GI | 90022839 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.155979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCACACC GCAACATATA CGATAACCCA CCCAACACGC TCACCACCGG TGCCCAGTAC
TTTGTACAGG GCATCAACCT GTTGTGGCAC CCGCAGTTGC GCGTATACAT ATTGATCCCC
CTGCTGGTGA ACTGCATCCT ATTTGTTGCG CTTACCACTG TTTTTATCGG TTACTTTAAT
TACTGGGCAG AAATCATTAC TGGCAGCATC GAAGTGGATA TGGGGTGGTT TACCTCCATC
ATCGTGTGGG TGCTAAAAGC GCTGGCTTGG TTTGGCCTTA TTGTTCTAGG CGTAATACTA
TTAATGGTAT ATGGCTACAG CTTTAACGTT ATTACCAATA TTATTGCAGC GCCTTTTTAC
GGCTTGCTTG CCGAAAAAAC CGAGATGCTT ATTACGGGCA AAAAAGGCGA AGGTGAACCC
CTCGCGCAAA TGATACCCCG TGTAATAGGC CGCGAAATTT CAAAGTTGTG GTACTTTTTA
TCCCGCGGCT TTGTCATTAT GCTTATTGTA TTACTACTTA GCACCATTCC ACTTATCAAC
CTTATCGCAC CGTTTATTGG TTTATTGTGG AGTGCATGGT CAATGGCAAT TCAATACGGC
GATTACGCAG CCGATAACAA CCGACTGGAC TTTAAAGAGC TACGCCAACG CCTGTGGCAA
AAGAAATACT CCAGCCTAGG TTTTGGCGGC ATTGTTATGG GCTGCAGTGT GGTGCCCATT
CTCAACATTT TTGCTATGCC CGCAGCCGTT ACTGGCGGCA CAATTTACTG GGTAAAAGAG
CTGCGCGATA ACCCTCCCAA ACAGTAA
|
|---|
| Protein sequence | MPHRNIYDNP PNTLTTGAQY FVQGINLLWH PQLRVYILIP LLVNCILFVA LTTVFIGYFN
YWAEIITGSI EVDMGWFTSI IVWVLKALAW FGLIVLGVIL LMVYGYSFNV ITNIIAAPFY
GLLAEKTEML ITGKKGEGEP LAQMIPRVIG REISKLWYFL SRGFVIMLIV LLLSTIPLIN
LIAPFIGLLW SAWSMAIQYG DYAADNNRLD FKELRQRLWQ KKYSSLGFGG IVMGCSVVPI
LNIFAMPAAV TGGTIYWVKE LRDNPPKQ
|
|---|
| |