| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3190 |
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| Symbol | |
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| ID | 3965643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4067905 |
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| End bp | 4068393 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922287 |
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| Product | rod shape-determining protein MreD |
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| Protein accession | YP_528659 |
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| Protein GI | 90022832 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2891] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0548619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAATC TCGGCCTGTC CTTTTATATT TTCTTCTGTG TATCTGCATT CTTTGCACTA
GTTCTATCTA TTTATCCTAT CCCTCACGCT TATGCGGCAT TGCGGCCAGA GCTTTTTTGC
CTGTTGGTAG TGTACTGGGT TATTAACTAT CCGCAGTATT TTGGCGTAAC CACAGCTTGG
TTAATGGGCC TGTTTTTAGA TGTTGTGCAC AGCACTGTTT GGGGCGCACA CGCTCTGGGC
TTGGCTGCTG TGGCTTATAT TTGTTTGTCA TCTTACCAGC GCATTCGCAG CTACTCGCTG
TGGCAGCAAA CGCTGTGGGT GTTTGTATTT GTGGGCATTC ATCAGGTTAT TGTGAATTGG
ATGCTGGGTT TAAGTGGTTA CCATAAGCCC ACTCATATTA TTTTGGTGAC CACGGCAGTA
AGTGCACTTA GCTGGCCGGT TATGGTGCTG TTGTTTAGGC GCCTGCGTCG CCGCTATAGA
TTGCTATAG
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| Protein sequence | MPNLGLSFYI FFCVSAFFAL VLSIYPIPHA YAALRPELFC LLVVYWVINY PQYFGVTTAW
LMGLFLDVVH STVWGAHALG LAAVAYICLS SYQRIRSYSL WQQTLWVFVF VGIHQVIVNW
MLGLSGYHKP THIILVTTAV SALSWPVMVL LFRRLRRRYR LL
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