Gene Sde_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3182 
Symbol 
ID3965635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4057348 
End bp4057617 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content46% 
IMG OID637922279 
ProductHNH nuclease 
Protein accessionYP_528651 
Protein GI90022824 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTATC GCGAAACAGA AATCATTAAC AAGTTAGGCC TGCACGCACG GGCCGCATCC 
AAGTTCGCCA ATTTAGCCAC TCGTTTTCAA TGCAAAATAA CGGTTAAACT AGGCGAGAAA
AGTATCGATG GCAAAAGTAT TATGTCGCTG ATGCTTCTGG CCGCGGGAAT TGGTAGCCAA
ATAGCTATCA CAACTGAAGG CTCAGACGAA GAAGAAGCAA TGGATGCCCT TCTAGAGTTA
ATTAACAACC GCTTCGACGA GCCGGAATAA
 
Protein sequence
MQYRETEIIN KLGLHARAAS KFANLATRFQ CKITVKLGEK SIDGKSIMSL MLLAAGIGSQ 
IAITTEGSDE EEAMDALLEL INNRFDEPE